RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 GAGE4Q13068 117 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 GAGE5Q13069 117 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 ZNF506Q5JVG8 444 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 EIF5AL1Q6IS14 154 aaKnown RBP8.12□□□□□ -1.11
SAMM50-205ENST00000493621 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 C9orf85Q96MD7 179 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 NDFIP1Q9BT67 221 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 HMCN2Q8NDA2 5059 aa8.12□□□□□ -1.11
SAMM50-205ENST00000493621 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 RBFOX3A6NFN3 312 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 TAAR5O14804 337 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 MT-ND4LP03901 98 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 CYCSP99999 105 aaKnown RBP8.11□□□□□ -1.11
SAMM50-205ENST00000493621 PQLC2Q6ZP29 291 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 TMEM75Q8N9X5 138 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
SAMM50-205ENST00000493621 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 GGTLC3B5MD39 225 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
SAMM50-205ENST00000493621 GCGP01275 180 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 H2BFSP57053 126 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
SAMM50-205ENST00000493621 RAB2AP61019 212 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
SAMM50-205ENST00000493621 INO80EQ8NBZ0 244 aaPredicted RBP8.1□□□□□ -1.11
SAMM50-205ENST00000493621 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 PTH2Q96A98 100 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 SH3BGRL3Q9H299 93 aa8.1□□□□□ -1.11
SAMM50-205ENST00000493621 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
SAMM50-205ENST00000493621 RNASE3P12724 160 aaKnown RBP8.09□□□□□ -1.11
SAMM50-205ENST00000493621 CHAC1Q9BUX1 264 aa8.09□□□□□ -1.11
SAMM50-205ENST00000493621 ZNF471Q9BX82 626 aaPredicted RBP8.09□□□□□ -1.11
SAMM50-205ENST00000493621 PARLQ9H300 379 aa8.09□□□□□ -1.11
SAMM50-205ENST00000493621 PSG8Q9UQ74 426 aa8.09□□□□□ -1.11
SAMM50-205ENST00000493621 COX11Q9Y6N1 276 aa8.09□□□□□ -1.11
SAMM50-205ENST00000493621 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 OXTP01178 125 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 TCRAP04437 139 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 ARL14EPLP0DKL9 152 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 RPL12P30050 165 aaKnown RBP8.08□□□□□ -1.12
SAMM50-205ENST00000493621 Q8N976 141 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 OR10G9Q8NGN4 311 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 OR10G7Q8NGN6 311 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 RMI2Q96E14 147 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 DNAJC30Q96LL9 226 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 SAMD10Q9BYL1 202 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 WFDC1Q9HC57 220 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 Q9UF83 564 aa8.08□□□□□ -1.12
SAMM50-205ENST00000493621 IGKV2D-24A0A075B6R9 120 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 A0A087WWC5 75 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 COLCA2A8K830 154 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 A8MWV9 139 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 K7EQM0 130 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 ZFP2Q6ZN57 461 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 PRNTQ86SH4 94 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 CYB561D1Q8N8Q1 229 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 C5orf17Q8NAS9 161 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 URGCP-MRPS24S4R325 110 aa8.07□□□□□ -1.12
SAMM50-205ENST00000493621 IGLV2-11P01706 119 aa8.06□□□□□ -1.12
SAMM50-205ENST00000493621 PET100P0DJ07 73 aa8.06□□□□□ -1.12
SAMM50-205ENST00000493621 S100A4P26447 101 aaKnown RBP8.06□□□□□ -1.12
SAMM50-205ENST00000493621 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
SAMM50-205ENST00000493621 CBLN2Q8IUK8 224 aa8.06□□□□□ -1.12
SAMM50-205ENST00000493621 C14orf178Q8N769 122 aaPredicted RBP8.06□□□□□ -1.12
SAMM50-205ENST00000493621 JPT2Q9H910 190 aa8.06□□□□□ -1.12
SAMM50-205ENST00000493621 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
SAMM50-205ENST00000493621 ADCYAP1P18509 176 aa8.05□□□□□ -1.12
SAMM50-205ENST00000493621 RAB4AP20338 218 aa8.05□□□□□ -1.12
SAMM50-205ENST00000493621 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-205ENST00000493621 FGF8P55075 233 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-205ENST00000493621 RHEBQ15382 184 aa8.05□□□□□ -1.12
SAMM50-205ENST00000493621 NIT1Q86X76 327 aa8.05□□□□□ -1.12
SAMM50-205ENST00000493621 LINC00479Q96M42 142 aa8.05□□□□□ -1.12
SAMM50-205ENST00000493621 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 IGLV2-8P01709 118 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 SEC11BP0C7V7 166 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 GCHFRP30047 84 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 ASIPP42127 132 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 SUMO1P63165 101 aaKnown RBP8.04□□□□□ -1.12
SAMM50-205ENST00000493621 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 UFSP1Q6NVU6 142 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 UBE2WQ96B02 151 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 SMDT1Q9H4I9 107 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
SAMM50-205ENST00000493621 S100A2P29034 98 aa8.03□□□□□ -1.12
SAMM50-205ENST00000493621 FABP9Q0Z7S8 132 aa8.03□□□□□ -1.12
SAMM50-205ENST00000493621 SAPCD1Q5SSQ6 148 aa8.03□□□□□ -1.12
SAMM50-205ENST00000493621 RAB24Q969Q5 203 aa8.03□□□□□ -1.12
SAMM50-205ENST00000493621 HIST1H2BAQ96A08 127 aa8.03□□□□□ -1.12
SAMM50-205ENST00000493621 A0A087WX48 190 aa8.02□□□□□ -1.13
SAMM50-205ENST00000493621 H3BVH4 76 aa8.02□□□□□ -1.13
SAMM50-205ENST00000493621 RPL37AP61513 92 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms