RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GOLT1BQ9Y3E0 138 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 TIMM8BQ9Y5J9 83 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 A0A1B0GWB2 263 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 INMT-MINDY4F8WBC2 141 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 LECT2O14960 151 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 GNRH2O43555 120 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 OR7C2O60412 319 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 MED6O75586 246 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 UPK1BO75841 260 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 IFNA21P01568 189 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 STAG3L2P0CL84 134 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 AP3S2P59780 193 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 UBE2G2P60604 165 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 B2MP61769 119 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 RANP62826 216 aaKnown RBP1.86□□□□□ -2.11
PTCD3-218ENST00000493430 UBE2L3P68036 154 aaKnown RBP1.86□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF266Q14584 549 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF846Q147U1 533 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 MRPL23Q16540 153 aaKnown RBP1.86□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM183BQ1AE95 376 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 LCN15Q6UWW0 184 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 DPPA3Q6W0C5 159 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 SPATA12Q7Z6I5 190 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF546Q86UE3 836 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM183AQ8IXX5 376 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 HSD17B11Q8NBQ5 300 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 OR10P1Q8NGE3 313 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 C15orf40Q8WUR7 153 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 C2orf50Q96LR7 162 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 SCGB3A2Q96PL1 93 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 NPVFQ9HCQ7 196 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 LYRM2Q9NU23 88 aaPredicted RBP1.86□□□□□ -2.11
PTCD3-218ENST00000493430 UQCC1Q9NVA1 299 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 FUT9Q9Y231 359 aa1.86□□□□□ -2.11
PTCD3-218ENST00000493430 TRBV19A0A075B6N1 114 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 TMSB15BA0A087X1C1 80 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 NBDYA0A0U1RRE5 68 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 A0A1W2PPV4 95 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 C7orf71A4D174 169 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 NAP1L6A6NFF2 107 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 C16orf90A8MZG2 172 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 GGTLC3B5MD39 225 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 C11orf94C9JXX5 98 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 SSNA1O43805 119 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 SERF1AO75920 110 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 MPC2O95563 127 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 MBP02144 154 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 SMR3BP02814 79 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 TYMSP04818 313 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 ARL14EPLP0DKL9 152 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 P0DMU3 169 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 FAM231AP0DMU4 169 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 FAM231CP0DMU5 169 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 RPL7P18124 248 aaKnown RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 LEPP41159 167 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 SULT1A1P50225 295 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 AP2S1P53680 142 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 RPL19P84098 196 aaKnown RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF726P1Q15940 193 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 C1orf194Q5T5A4 169 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 Q6ZRN7 208 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 GOLT1AQ6ZVE7 132 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 IQCF2Q8IXL9 164 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 OR10G4Q8NGN3 311 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM263Q8WUH6 116 aaKnown RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 PPP1R1CQ8WVI7 109 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 GNPNAT1Q96EK6 184 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 FAM19A4Q96LR4 140 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 WDR61Q9GZS3 305 aaKnown RBP1.85□□□□□ -2.11
PTCD3-218ENST00000493430 Q9H3A6 140 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 HSPB11Q9Y547 144 aa1.85□□□□□ -2.11
PTCD3-218ENST00000493430 IGLV8-61A0A075B6I0 122 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 GRIFINA4D1Z8 144 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 CENPXA8MT69 81 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 C9JCJ5 164 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 TEX46H3BTG2 121 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 M0R036 132 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF324O75467 553 aaPredicted RBP1.84□□□□□ -2.11
PTCD3-218ENST00000493430 TSPAN13O95857 204 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 IGHV3-30P01768 117 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 IGHV3-33P01772 117 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 RLN2P04090 185 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 ATP5G1P05496 136 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 GPX1P07203 203 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 NBEAP1P0C6P0 100 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 IGHV3-30-3P0DP02 117 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 IGHV3-30-5P0DP03 117 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 ATP6V0CP27449 155 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 RPL29P47914 159 aaKnown RBP1.84□□□□□ -2.11
PTCD3-218ENST00000493430 ATP5G3P48201 142 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 CMC4P56277 68 aaPredicted RBP1.84□□□□□ -2.11
PTCD3-218ENST00000493430 TAS2R60P59551 318 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 NUTF2P61970 127 aaKnown RBP1.84□□□□□ -2.11
PTCD3-218ENST00000493430 RPL32P62910 135 aaKnown RBP1.84□□□□□ -2.11
PTCD3-218ENST00000493430 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
PTCD3-218ENST00000493430 RPL7L1Q6DKI1 246 aaKnown RBP1.84□□□□□ -2.11
PTCD3-218ENST00000493430 UFSP1Q6NVU6 142 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms