RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SDF2L1Q9HCN8 221 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 IL36BQ9NZH7 164 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 LY96Q9Y6Y9 160 aa4.7□□□□□ -1.66
VPS52-219ENST00000493379 DEFB130BP0DP73 79 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 DEFB130AP0DP74 79 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 IFITM2Q01629 132 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 SLAQ13239 276 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 FHL2Q14192 279 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 ZNF767PQ75MW2 155 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 C15orf53Q8NAA6 179 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 DERL1Q9BUN8 251 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 MED9Q9NWA0 146 aa4.69□□□□□ -1.66
VPS52-219ENST00000493379 TRGV1A0A0A0MS02 117 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 TRAV4A0A0B4J268 109 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 IGLL5B9A064 214 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 RS1O15537 224 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 SNAI2O43623 268 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 SH2D1AO60880 128 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 GAGE7O76087 117 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 NXPH4O95158 308 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 SRP19P09132 144 aaKnown RBP4.68□□□□□ -1.66
VPS52-219ENST00000493379 OR5AL1P0C617 328 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 GAGE12FP0CL80 117 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 GAGE12GP0CL81 117 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 GAGE12IP0CL82 117 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 RNF212Q495C1 297 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 UFSP1Q6NVU6 142 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 VSIG2Q96IQ7 327 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 BIN3Q9NQY0 253 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 LRP1BQ9NZR2 4599 aa4.68□□□□□ -1.66
VPS52-219ENST00000493379 RAB19A4D1S5 217 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 B4DEV8 164 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 ASIPP42127 132 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 FOXA3P55318 350 aaPredicted RBP4.67□□□□□ -1.66
VPS52-219ENST00000493379 CENPWQ5EE01 88 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 WDR73Q6P4I2 378 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 ZFP2Q6ZN57 461 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 PARLQ9H300 379 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 PRO0255Q9UI72 69 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 MUC2Q02817 5179 aa4.67□□□□□ -1.66
VPS52-219ENST00000493379 TRGV2A0A075B6R0 118 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
VPS52-219ENST00000493379 C9JQL5 133 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 F5H768 121 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 K7EN84 100 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 ORM1P02763 201 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 ARMS2P0C7Q2 107 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 IGLC6P0CF74 106 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 P0DMU3 169 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 FAM231AP0DMU4 169 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 FAM231CP0DMU5 169 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 GNG4P50150 75 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 CRYBA4P53673 196 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 ZNF876PQ49A33 203 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 FAM74A3Q4VXF1 159 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 CLLU1Q5K131 121 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 CFAP126Q5VTH2 177 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 CNFNQ9BYD5 112 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 MRPL16Q9NX20 251 aaKnown RBP4.66□□□□□ -1.66
VPS52-219ENST00000493379 NAGKQ9UJ70 344 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 HHLA3Q9XRX5 114 aa4.66□□□□□ -1.66
VPS52-219ENST00000493379 TRBV6-4A0A1B0GX49 114 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 A8MWV9 139 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 CRYGDP07320 174 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 GATA1P15976 413 aaPredicted RBP4.65□□□□□ -1.67
VPS52-219ENST00000493379 CAMPP49913 170 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 RPS20P60866 119 aaKnown RBP4.65□□□□□ -1.67
VPS52-219ENST00000493379 PEA15Q15121 130 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 LINC01551Q86U37 167 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 NHLRC2Q8NBF2 726 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 OR4C5Q8NGB2 326 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 SFRP2Q96HF1 295 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 ZNF479Q96JC4 524 aa4.65□□□□□ -1.67
VPS52-219ENST00000493379 EIF5A2Q9GZV4 153 aaKnown RBP4.65□□□□□ -1.67
VPS52-219ENST00000493379 TRAV26-1A0A087WT03 109 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 A0A096LPF7 62 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 A0A1W2PPQ1 181 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 GRIFINA4D1Z8 144 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 FAM231BA6NCW3 169 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 F2Z2F3 143 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 M0R036 132 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 INAFM2P0DMQ5 153 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 MGST1P10620 155 aaKnown RBP4.64□□□□□ -1.67
VPS52-219ENST00000493379 S100A4P26447 101 aaKnown RBP4.64□□□□□ -1.67
VPS52-219ENST00000493379 LINC00315P59091 139 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 OR5I1Q13606 314 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 UPK3BQ9BT76 320 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 MSRB1Q9NZV6 116 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 KIF25-AS1Q9Y6Z4 181 aa4.64□□□□□ -1.67
VPS52-219ENST00000493379 XKRY2A2RUG3 117 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 ZNF727A8MUV8 499 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 P01737 135 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 IGHV3-53P01767 116 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 SFTA3P0C7M3 94 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 LINC00694P0DN24 101 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 HTN3P15516 51 aa4.63□□□□□ -1.67
VPS52-219ENST00000493379 RPL19P84098 196 aaKnown RBP4.63□□□□□ -1.67
VPS52-219ENST00000493379 MRPL23Q16540 153 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms