RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 USP17L23D6RBM5 183 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 F6UZH7 168 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 CDC34P49427 236 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-214ENST00000492858 RANP62826 216 aaKnown RBP7.68□□□□□ -1.18
GPNMB-214ENST00000492858 TEX261Q6UWH6 196 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 C9orf163Q8N9P6 203 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 KCNS1Q96KK3 526 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 C1orf43Q9BWL3 253 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 Q9UF83 564 aa7.68□□□□□ -1.18
GPNMB-214ENST00000492858 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 PRSS1P07477 247 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 FHITP49789 147 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 ELOBQ15370 118 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 KHDC3LQ587J8 217 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 ZNF506Q5JVG8 444 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 AKR1C8PQ5T2L2 129 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
GPNMB-214ENST00000492858 ACTR3CQ9C0K3 210 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-214ENST00000492858 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 TAS2R45P59539 299 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 IFITM2Q01629 132 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 Q0VG73 95 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 SAMD10Q9BYL1 202 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
GPNMB-214ENST00000492858 A0A1W2PPV4 95 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 OR7C2O60412 319 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 HLA-DQA1P01909 254 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 GCHFRP30047 84 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 DMRTA1Q5VZB9 504 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 KCNIP4Q6PIL6 250 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 ARL6IP6Q8N6S5 226 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 ARL2-SNX15V9GYD0 113 aa7.65□□□□□ -1.18
GPNMB-214ENST00000492858 PGPA6NDG6 321 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 CXorf1O96002 111 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 ARL14EPLP0DKL9 152 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 FGF8P55075 233 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-214ENST00000492858 RPL19P84098 196 aaKnown RBP7.64□□□□□ -1.19
GPNMB-214ENST00000492858 ALKAL2Q6UX46 152 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 C14orf178Q8N769 122 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-214ENST00000492858 TVP23CQ96ET8 276 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 DPH3Q96FX2 82 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 PARLQ9H300 379 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 TREM1Q9NP99 234 aa7.64□□□□□ -1.19
GPNMB-214ENST00000492858 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 MAP1LC3B2A6NCE7 125 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 PHOX2AO14813 284 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 EIF3GO75821 320 aaKnown RBP eCLIP7.63□□□□□ -1.19
GPNMB-214ENST00000492858 CRPP02741 224 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 UBE2L3P68036 154 aaKnown RBP7.63□□□□□ -1.19
GPNMB-214ENST00000492858 CIRBPQ14011 172 aaKnown RBP7.63□□□□□ -1.19
GPNMB-214ENST00000492858 FAM74A1Q5RGS3 127 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 ENHOQ6UWT2 76 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 ZFP2Q6ZN57 461 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 PTH2Q96A98 100 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 LINC00479Q96M42 142 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 MAP1LC3BQ9GZQ8 125 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 TMEM167BQ9NRX6 74 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 C11orf21Q9P2W6 132 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 KIF25-AS1Q9Y6Z4 181 aa7.63□□□□□ -1.19
GPNMB-214ENST00000492858 A0A087WYN8 130 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 A0A1W2PRE2 83 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 NDUFS6O75380 124 aaKnown RBP7.62□□□□□ -1.19
GPNMB-214ENST00000492858 IFNA7P01567 189 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 H2AFB1P0C5Y9 115 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 KRTAP10-8P60410 259 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 WDR73Q6P4I2 378 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 GOLT1AQ6ZVE7 132 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 C15orf54Q8N8G6 183 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 FAM213BQ8TBF2 198 aa7.62□□□□□ -1.19
GPNMB-214ENST00000492858 A8MWV9 139 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 TMEM262E9PQX1 116 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
GPNMB-214ENST00000492858 CHTF8P0CG12 524 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 RNASE3P12724 160 aaKnown RBP7.61□□□□□ -1.19
GPNMB-214ENST00000492858 BLOC1S1P78537 153 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 CCL20P78556 96 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 TMEM75Q8N9X5 138 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 CMTM2Q8TAZ6 248 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 C7orf33Q8WU49 177 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
GPNMB-214ENST00000492858 FAM74A7A6NL05 159 aa7.6□□□□□ -1.19
GPNMB-214ENST00000492858 SFT2D1Q8WV19 159 aa7.6□□□□□ -1.19
GPNMB-214ENST00000492858 JPT2Q9H910 190 aa7.6□□□□□ -1.19
GPNMB-214ENST00000492858 OTORQ9NRC9 128 aa7.6□□□□□ -1.19
GPNMB-214ENST00000492858 ANGP03950 147 aaKnown RBP7.59□□□□□ -1.19
GPNMB-214ENST00000492858 ZNF80P51504 273 aaPredicted RBP7.59□□□□□ -1.19
GPNMB-214ENST00000492858 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
GPNMB-214ENST00000492858 TCEAL7Q9BRU2 100 aa7.59□□□□□ -1.19
GPNMB-214ENST00000492858 NKX6-2Q9C056 277 aaPredicted RBP7.59□□□□□ -1.19
GPNMB-214ENST00000492858 MPV17L2Q567V2 206 aa7.58□□□□□ -1.2
GPNMB-214ENST00000492858 CLLU1Q5K131 121 aa7.58□□□□□ -1.2
GPNMB-214ENST00000492858 UFSP1Q6NVU6 142 aa7.58□□□□□ -1.2
GPNMB-214ENST00000492858 SGK494Q96LW2 274 aa7.58□□□□□ -1.2
GPNMB-214ENST00000492858 NDFIP1Q9BT67 221 aa7.58□□□□□ -1.2
GPNMB-214ENST00000492858 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms