RNA–Protein interactions for RNA: ENST00000491952.1

TTC3-222, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-222ENST00000491952 BATF3Q9NR55 127 aa-1.53□□□□□ -2.65
TTC3-222ENST00000491952 AKAP11Q9UKA4 1901 aa-1.53□□□□□ -2.65
TTC3-222ENST00000491952 PLXNA2O75051 1894 aa-1.54□□□□□ -2.66
TTC3-222ENST00000491952 MED31Q9Y3C7 131 aa-1.54□□□□□ -2.66
TTC3-222ENST00000491952 CASZ1Q86V15 1759 aa-1.54□□□□□ -2.66
TTC3-222ENST00000491952 PTPRMP28827 1452 aa-1.55□□□□□ -2.66
TTC3-222ENST00000491952 PNMA8CA0A1B0GUJ8 204 aa-1.55□□□□□ -2.66
TTC3-222ENST00000491952 UQCRQO14949 82 aa-1.55□□□□□ -2.66
TTC3-222ENST00000491952 DEGS1O15121 323 aa-1.55□□□□□ -2.66
TTC3-222ENST00000491952 RPL22P35268 128 aaKnown RBP-1.55□□□□□ -2.66
TTC3-222ENST00000491952 C3orf33Q6P1S2 294 aa-1.55□□□□□ -2.66
TTC3-222ENST00000491952 HOPXQ9BPY8 73 aaPredicted RBP-1.55□□□□□ -2.66
TTC3-222ENST00000491952 METTL1Q9UBP6 276 aaKnown RBP-1.55□□□□□ -2.66
TTC3-222ENST00000491952 FLGP20930 4061 aaPredicted RBP-1.55□□□□□ -2.66
TTC3-222ENST00000491952 ZNF142P52746 1687 aaPredicted RBP-1.55□□□□□ -2.66
TTC3-222ENST00000491952 A2MP01023 1474 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 KIF13AQ9H1H9 1805 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 TCRAP04437 139 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 PLGLB1Q02325 96 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 TMED4Q7Z7H5 227 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 STX12Q86Y82 276 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 TAS2R8Q9NYW2 309 aa-1.56□□□□□ -2.66
TTC3-222ENST00000491952 EP300Q09472 2414 aaPredicted RBP-1.56□□□□□ -2.66
TTC3-222ENST00000491952 YTHDC2Q9H6S0 1430 aaKnown RBP-1.57□□□□□ -2.66
TTC3-222ENST00000491952 TRBV10-3A0A0K0K1G6 114 aa-1.57□□□□□ -2.66
TTC3-222ENST00000491952 K7EQZ3 153 aa-1.57□□□□□ -2.66
TTC3-222ENST00000491952 SERPINB1P30740 379 aa-1.57□□□□□ -2.66
TTC3-222ENST00000491952 HSD17B12Q53GQ0 312 aa-1.57□□□□□ -2.66
TTC3-222ENST00000491952 CCDC32Q9BV29 185 aa-1.57□□□□□ -2.66
TTC3-222ENST00000491952 ARHGAP31Q2M1Z3 1444 aa-1.57□□□□□ -2.66
TTC3-222ENST00000491952 CCDC171Q6TFL3 1326 aa-1.58□□□□□ -2.66
TTC3-222ENST00000491952 PGRMC1O00264 195 aaKnown RBP-1.58□□□□□ -2.66
TTC3-222ENST00000491952 RPL7P18124 248 aaKnown RBP-1.58□□□□□ -2.66
TTC3-222ENST00000491952 POLR2HP52434 150 aaKnown RBP-1.58□□□□□ -2.66
TTC3-222ENST00000491952 ARAP1Q96P48 1450 aa-1.58□□□□□ -2.66
TTC3-222ENST00000491952 PHIPQ8WWQ0 1821 aa-1.59□□□□□ -2.66
TTC3-222ENST00000491952 SPTBN1Q01082 2364 aaKnown RBP-1.59□□□□□ -2.66
TTC3-222ENST00000491952 A0A1W2PRE2 83 aa-1.59□□□□□ -2.66
TTC3-222ENST00000491952 HAMPP81172 84 aa-1.59□□□□□ -2.66
TTC3-222ENST00000491952 TMEM78Q5T7P6 136 aa-1.59□□□□□ -2.66
TTC3-222ENST00000491952 THEM6Q8WUY1 208 aa-1.59□□□□□ -2.66
TTC3-222ENST00000491952 SLC35B3Q9H1N7 401 aa-1.59□□□□□ -2.66
TTC3-222ENST00000491952 BCL9LQ86UU0 1499 aa-1.6□□□□□ -2.67
TTC3-222ENST00000491952 MT4P47944 62 aa-1.6□□□□□ -2.67
TTC3-222ENST00000491952 NDUFA11Q86Y39 141 aa-1.6□□□□□ -2.67
TTC3-222ENST00000491952 SNX29P2Q8IUI4 249 aa-1.6□□□□□ -2.67
TTC3-222ENST00000491952 DYNLRB2Q8TF09 96 aa-1.6□□□□□ -2.67
TTC3-222ENST00000491952 USH2AO75445 5202 aa-1.6□□□□□ -2.67
TTC3-222ENST00000491952 ZMYM4Q5VZL5 1548 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 PLCE1Q9P212 2302 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 TRAV2A0A0B4J234 112 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 TRAV1-2A0A0B4J238 106 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 HIST1H1BP16401 226 aaKnown RBP-1.61□□□□□ -2.67
TTC3-222ENST00000491952 SCP2D1Q9UJQ7 156 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 STOML2Q9UJZ1 356 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 PKHD1P08F94 4074 aa-1.61□□□□□ -2.67
TTC3-222ENST00000491952 EIF3AQ14152 1382 aaKnown RBP-1.61□□□□□ -2.67
TTC3-222ENST00000491952 SYNMO15061 1565 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 C10orf71Q711Q0 1435 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 TRAV12-3A0A0B4J271 114 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 MRPS15P82914 257 aaKnown RBP-1.62□□□□□ -2.67
TTC3-222ENST00000491952 SPCS2Q15005 226 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 CHMP6Q96FZ7 201 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 ERG28Q9UKR5 140 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 USF3Q68DE3 2245 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 MED23Q9ULK4 1368 aa-1.62□□□□□ -2.67
TTC3-222ENST00000491952 NRXN2Q9P2S2 1712 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 MXRA5Q9NR99 2828 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 LOC730098B7Z3J9 87 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 FAM107AO95990 144 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 PSPHP78330 225 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 BOLA2Q9H3K6 86 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 GID8Q9NWU2 228 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 NOP16Q9Y3C1 178 aaKnown RBP-1.63□□□□□ -2.67
TTC3-222ENST00000491952 DNAJC15Q9Y5T4 150 aa-1.63□□□□□ -2.67
TTC3-222ENST00000491952 BCE1O60756 84 aa-1.64□□□□□ -2.67
TTC3-222ENST00000491952 EDDM3BP56851 147 aa-1.64□□□□□ -2.67
TTC3-222ENST00000491952 WFDC6Q9BQY6 131 aa-1.64□□□□□ -2.67
TTC3-222ENST00000491952 SPCS1Q9Y6A9 102 aa-1.64□□□□□ -2.67
TTC3-222ENST00000491952 SVEP1Q4LDE5 3571 aa-1.64□□□□□ -2.67
TTC3-222ENST00000491952 KDM5CP41229 1560 aa-1.64□□□□□ -2.67
TTC3-222ENST00000491952 E7EQ34 232 aa-1.65□□□□□ -2.67
TTC3-222ENST00000491952 PIN1P1O15428 100 aa-1.65□□□□□ -2.67
TTC3-222ENST00000491952 TMEM91Q6ZNR0 172 aa-1.65□□□□□ -2.67
TTC3-222ENST00000491952 CCDC115Q96NT0 180 aa-1.65□□□□□ -2.67
TTC3-222ENST00000491952 HIVEP1P15822 2718 aa-1.65□□□□□ -2.67
TTC3-222ENST00000491952 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.66□□□□□ -2.67
TTC3-222ENST00000491952 ARFGEF1Q9Y6D6 1849 aa-1.66□□□□□ -2.67
TTC3-222ENST00000491952 FXYD6-FXYD2A0A087WZ82 144 aa-1.66□□□□□ -2.68
TTC3-222ENST00000491952 ATP6V0E2Q8NHE4 81 aa-1.66□□□□□ -2.68
TTC3-222ENST00000491952 TMEM238C9JI98 176 aa-1.67□□□□□ -2.68
TTC3-222ENST00000491952 M0R2P5 195 aa-1.67□□□□□ -2.68
TTC3-222ENST00000491952 PFDN1O60925 122 aa-1.67□□□□□ -2.68
TTC3-222ENST00000491952 SCN3BQ9NY72 215 aa-1.67□□□□□ -2.68
TTC3-222ENST00000491952 ATRQ13535 2644 aa-1.67□□□□□ -2.68
TTC3-222ENST00000491952 IBTKQ9P2D0 1353 aaPredicted RBP-1.68□□□□□ -2.68
TTC3-222ENST00000491952 LAMC1P11047 1609 aa-1.68□□□□□ -2.68
TTC3-222ENST00000491952 MT-ND4LP03901 98 aa-1.68□□□□□ -2.68
TTC3-222ENST00000491952 TRIQKQ629K1 86 aa-1.68□□□□□ -2.68
TTC3-222ENST00000491952 CNOT1A5YKK6 2376 aaKnown RBP-1.68□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms