RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 STAB2Q8WWQ8 2551 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 MUC4Q99102 2169 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 OR4C46A6NHA9 309 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 HSBP1L1C9JCN9 74 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 J3KRW8 73 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 NDUFA7O95182 113 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 TFPI2P48307 235 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 LGALS9BQ3B8N2 356 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 LGALS9CQ6DKI2 356 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 DYNLRB2Q8TF09 96 aa8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 SPAG8Q99932 426 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 TSSC4Q9Y5U2 329 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-210ENST00000491467 TRGV11A0A075B6L2 103 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 LINC01549A6NIU2 74 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 GNRH2O43555 120 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 HLA-DRB4P13762 266 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 G0S2P27469 103 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 DEFB1P60022 68 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 FHL3Q13643 280 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 DEFB114Q30KQ6 69 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 KHDC1LQ5JSQ8 128 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 NRACQ8N912 160 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 DLX4Q92988 240 aaPredicted RBP8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 HLA-DRB4X5D2U9 266 aa8.84□□□□□ -0.99
SRGAP3-210ENST00000491467 IGLV2-18A0A075B6J9 118 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 IGHV1OR15-1A0A075B7D0 117 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 A0A096LNJ9 63 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 TRAV12-3A0A0B4J271 114 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 SMKR1H3BMG3 65 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 M0R143 59 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 NCR2O95944 276 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 CD7P09564 240 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 SMIM17P0DL12 118 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 IGLC3P0DOY3 106 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 AMTNQ6UX39 209 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 Q6ZQT7 251 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 C18orf65Q6ZTR6 163 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 C9orf85Q96MD7 179 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 C2orf88Q9BSF0 95 aa8.83□□□□□ -1
SRGAP3-210ENST00000491467 CCL24O00175 119 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 ATP5LO75964 103 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 LAGE3Q14657 143 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 DEFB136Q30KP8 78 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 PIK3CD-AS1Q5SR53 167 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 LINC01006Q8NI28 216 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 LINC00467Q9BRT7 94 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 AGRNO00468 2067 aa8.82□□□□□ -1
SRGAP3-210ENST00000491467 IGHV3-16A0A0C4DH30 117 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 H3BMM0 161 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 K7EIL1 84 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 DEFB131AP59861 70 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 KIR3DS1Q14943 382 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 ORMDL2Q53FV1 153 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 PTH2Q96A98 100 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 RAX2Q96IS3 184 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 MRPS16Q9Y3D3 137 aaKnown RBP8.81□□□□□ -1
SRGAP3-210ENST00000491467 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
SRGAP3-210ENST00000491467 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
SRGAP3-210ENST00000491467 IGLL1P15814 213 aa8.8□□□□□ -1
SRGAP3-210ENST00000491467 SUMO2P61956 95 aaKnown RBP8.8□□□□□ -1
SRGAP3-210ENST00000491467 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
SRGAP3-210ENST00000491467 MUC7Q8TAX7 377 aa8.8□□□□□ -1
SRGAP3-210ENST00000491467 SMIM2Q9BVW6 85 aa8.8□□□□□ -1
SRGAP3-210ENST00000491467 CD28P10747 220 aa8.79□□□□□ -1
SRGAP3-210ENST00000491467 SPINK13Q1W4C9 94 aa8.79□□□□□ -1
SRGAP3-210ENST00000491467 C14orf178Q8N769 122 aaPredicted RBP8.79□□□□□ -1
SRGAP3-210ENST00000491467 RASL10AQ92737 203 aa8.79□□□□□ -1
SRGAP3-210ENST00000491467 FAM110AQ9BQ89 295 aa8.79□□□□□ -1
SRGAP3-210ENST00000491467 MAP6D1Q9H9H5 199 aa8.79□□□□□ -1
SRGAP3-210ENST00000491467 SELENOKQ9Y6D0 94 aa8.79□□□□□ -1
SRGAP3-210ENST00000491467 TCAPO15273 167 aa8.78□□□□□ -1
SRGAP3-210ENST00000491467 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
SRGAP3-210ENST00000491467 ATOH7Q8N100 152 aa8.78□□□□□ -1
SRGAP3-210ENST00000491467 Q8N1Y9 231 aa8.78□□□□□ -1
SRGAP3-210ENST00000491467 B9D2Q9BPU9 175 aa8.78□□□□□ -1
SRGAP3-210ENST00000491467 GOLT1BQ9Y3E0 138 aa8.78□□□□□ -1
SRGAP3-210ENST00000491467 DNAH7Q8WXX0 4024 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 TRBV6-5A0A0K0K1A5 114 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 IGKV3-20P01619 116 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 MGPP08493 103 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 HNRNPA3P51991 378 aaKnown RBP8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 LINC00315P59091 139 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 CD300EQ496F6 205 aaPredicted RBP8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 Q6ZN92 141 aa8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 CITED2Q99967 270 aaPredicted RBP8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 ZNF256Q9Y2P7 627 aaPredicted RBP8.77□□□□□ -1.01
SRGAP3-210ENST00000491467 TRAV12-2A0A075B6T6 113 aa8.76□□□□□ -1.01
SRGAP3-210ENST00000491467 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
SRGAP3-210ENST00000491467 KNCNA6PVL3 124 aa8.76□□□□□ -1.01
SRGAP3-210ENST00000491467 SLC25A34Q6PIV7 304 aa8.76□□□□□ -1.01
SRGAP3-210ENST00000491467 DUX3Q96PT4 197 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms