RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 APOC3P02656 99 aa7.45□□□□□ -1.22
CLCNKA-206ENST00000491433 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
CLCNKA-206ENST00000491433 SVBPQ8N300 66 aa7.45□□□□□ -1.22
CLCNKA-206ENST00000491433 CLRN3Q8NCR9 226 aa7.45□□□□□ -1.22
CLCNKA-206ENST00000491433 ZFP30Q9Y2G7 519 aa7.45□□□□□ -1.22
CLCNKA-206ENST00000491433 TRBV7-9A0A0J9YWB2 115 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 KLLNB2CW77 178 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 B4DEV8 164 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 GAS8-AS1O95177 125 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 GPX1P07203 203 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 GYPEP15421 78 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 AKR1C3P42330 323 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 CSN1S1P47710 185 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 FLI1Q01543 452 aaPredicted RBP7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 ATRAIDQ6UW56 229 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 GOLT1AQ6ZVE7 132 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 TMEM183AQ8IXX5 376 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 AGPAT4-IT1Q9H0P7 198 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 PSG8Q9UQ74 426 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 LENEPQ9Y5L5 61 aa7.44□□□□□ -1.22
CLCNKA-206ENST00000491433 A0A087WWC5 75 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 TRAV8-1A0A0A6YYK1 113 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 TRAV34A0A0B4J273 112 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 K7EN84 100 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 K7EQM0 130 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 SNAPINO95295 136 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 TIRAPP58753 221 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 CENPWQ5EE01 88 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 LINC01556Q5JQF7 62 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 FAM231DQ6ZW35 169 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 Q86TA4 180 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 ZNF492Q9P255 531 aa7.43□□□□□ -1.22
CLCNKA-206ENST00000491433 IGHV1OR15-1A0A075B7D0 117 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 IGKV2-40A0A087WW87 121 aaPredicted RBP7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 TRAV8-6A0A0B4J262 113 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 C19orf71A6NCJ1 209 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 PGPEP1LA6NFU8 196 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 RS1O15537 224 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 IGKV2D-40P01614 121 aaPredicted RBP7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 CRISP2P16562 243 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 RNASE4P34096 147 aaKnown RBP7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 GNG4P50150 75 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 CEBPGP53567 150 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 RHEBQ15382 184 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 BAGE2Q86Y30 109 aa7.42□□□□□ -1.22
CLCNKA-206ENST00000491433 CRIP1P50238 77 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 ZNF138P52744 262 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 UBE2G1P62253 170 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 BTN1A1Q13410 526 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 LAGE3Q14657 143 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 SGK494Q96LW2 274 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 SPXQ9BT56 116 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 Q9HAA7 133 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 OSTCQ9NRP0 149 aa7.41□□□□□ -1.22
CLCNKA-206ENST00000491433 ERCC8Q13216 396 aa7.4□□□□□ -1.22
CLCNKA-206ENST00000491433 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
CLCNKA-206ENST00000491433 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
CLCNKA-206ENST00000491433 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
CLCNKA-206ENST00000491433 RPH3ALQ9UNE2 315 aa7.4□□□□□ -1.22
CLCNKA-206ENST00000491433 TRAV4A0A0B4J268 109 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 PFN1P07737 140 aaKnown RBP7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 OR10J3Q5JRS4 329 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 SCXQ7RTU7 201 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 PRNTQ86SH4 94 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 ZFAND2AQ8N6M9 145 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 NHLRC2Q8NBF2 726 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 RASL10AQ92737 203 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 ZC2HC1AQ96GY0 325 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 TP53TG3Q9ULZ0 132 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 COX11Q9Y6N1 276 aa7.39□□□□□ -1.23
CLCNKA-206ENST00000491433 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 ADIRFQ15847 76 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 CHAC1Q9BUX1 264 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 V9GYV3 84 aa7.38□□□□□ -1.23
CLCNKA-206ENST00000491433 TRGV11A0A075B6L2 103 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 TRAV8-3A0A0A6YYJ7 113 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 M0R036 132 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 PPP1R2P9O14990 202 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 MT-ND4LP03901 98 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 CT83Q5H943 113 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 LELP1Q5T871 98 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 OR4C5Q8NGB2 326 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 OR10G8Q8NGN5 311 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 Q8TAT8 98 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
CLCNKA-206ENST00000491433 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms