RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 A0A1B0GV72 72 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 TMEM89A2RUT3 159 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 CLPSL1A2RUU4 121 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 IGIPA6NJ69 53 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM223BA6NKX1 122 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 SMKR1H3BMG3 65 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 H3BUA1 57 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 NDUFA4O00483 81 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 GNRH2O43555 120 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 SAP30O75446 220 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 IGF1P05019 195 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 COX6CP09669 75 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 GATA1P15976 413 aaPredicted RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 ARL3P36405 182 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 ASIPP42127 132 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 PSMB2P49721 201 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 EFNA4P52798 201 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 FXYD2P54710 66 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 RIPPLY3P57055 190 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 FXYD7P58549 80 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 CKS1BP61024 79 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 HERVK_113P61574 105 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 SMAGPQ0VAQ4 97 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 C15orf32Q32M92 178 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 ETDBQ3ZM63 59 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 LCE1FQ5T754 118 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 CLEC2AQ6UVW9 174 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM159AQ6UWV7 190 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 APRG1Q8IVJ8 170 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 SBSPONQ8IVN8 264 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM223AQ8IWN6 122 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 PPDPFLQ8WWR9 84 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 RASL10AQ92737 203 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 DLX4Q92988 240 aaPredicted RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM19A4Q96LR4 140 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 KIR2DL4Q99706 377 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 SIRPDQ9H106 197 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 SPANXB1Q9NS25 103 aaPredicted RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 NHP2Q9NX24 153 aaKnown RBP1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 ERG28Q9UKR5 140 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 PYGO1Q9Y3Y4 419 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 KIF25-AS1Q9Y6Z4 181 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 WNK2Q9Y3S1 2297 aa1.51□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF318Q5VUA4 2279 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 FRYLO94915 3013 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TRAV41A0A0B4J266 112 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 LOC107984156A0A0G2JMH3 177 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 A0A0J9YX75 114 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 A0A0J9YY99 117 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TRBV30A0A0K0K1B3 111 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TRBV27A0A0K0K1C4 114 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 A0A1B0GVY2 172 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 C11orf86A6NJI1 115 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 A8MWV9 139 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 I3L3M4 83 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 LGALS9O00182 355 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 NPFFO15130 113 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 LEPROTO15243 131 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 DUSP14O95147 198 aaKnown RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 APOMO95445 188 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHV3-23P01764 117 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 IGHG2P01859 326 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TRGV3P03979 118 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 CRYGDP07320 174 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 LGALS1P09382 135 aaKnown RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 CD7P09564 240 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 SPINK8P0C7L1 97 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ZNF688P0C7X2 276 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 P0DMU3 169 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM231AP0DMU4 169 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 FAM231CP0DMU5 169 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 HLA-DMBP28068 263 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 RNASE4P34096 147 aaKnown RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 NBL1P41271 181 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 UBE2D1P51668 147 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 UCNP55089 124 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 DLX1P56177 255 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 LINC00315P59091 139 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 UBE2D3P61077 147 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 LMO4P61968 165 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 UBE2D2P62837 147 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 KLRB1Q12918 225 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 CIRBPQ14011 172 aaKnown RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 MRPL23Q16540 153 aaKnown RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TTC32Q5I0X7 151 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TCTEX1D4Q5JR98 221 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 CFAP126Q5VTH2 177 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ZFAND6Q6FIF0 208 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 C11orf71Q6IPW1 123 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 MORN3Q6PF18 240 aaPredicted RBP1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 Q6Q795 121 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 C2orf66Q6UXQ4 117 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 SCGB1D4Q6XE38 83 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ZFP2Q6ZN57 461 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 TEN1Q86WV5 123 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 NDUFA11Q86Y39 141 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 ARL17AQ8IVW1 177 aa1.5□□□□□ -2.17
SNRNP40-207ENST00000491106 C10orf126Q8N4M7 172 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms