RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 PRADC1Q9BSG0 188 aa13.97□□□□□ -0.17
SHROOM3-209ENST00000490690 DNAH7Q8WXX0 4024 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 PAX4O43316 350 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 S100A8P05109 93 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 HOXA5P20719 270 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 NTF3P20783 257 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 RIGQ13278 110 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 RHOHQ15669 191 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 PGLYRP4Q96LB8 373 aa13.96□□□□□ -0.17
SHROOM3-209ENST00000490690 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
SHROOM3-209ENST00000490690 GATA1P15976 413 aaPredicted RBP13.95□□□□□ -0.18
SHROOM3-209ENST00000490690 FAM74A4Q5TZK3 123 aa13.95□□□□□ -0.18
SHROOM3-209ENST00000490690 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
SHROOM3-209ENST00000490690 IMMP2LQ96T52 175 aa13.95□□□□□ -0.18
SHROOM3-209ENST00000490690 MUC4Q99102 2169 aa13.95□□□□□ -0.18
SHROOM3-209ENST00000490690 SNAPINO95295 136 aa13.94□□□□□ -0.18
SHROOM3-209ENST00000490690 CRYBA4P53673 196 aa13.94□□□□□ -0.18
SHROOM3-209ENST00000490690 DPH3P1Q9H4G8 78 aa13.94□□□□□ -0.18
SHROOM3-209ENST00000490690 TMEM242Q9NWH2 141 aa13.94□□□□□ -0.18
SHROOM3-209ENST00000490690 A0A087WWC5 75 aa13.93□□□□□ -0.18
SHROOM3-209ENST00000490690 CRYGDP07320 174 aa13.93□□□□□ -0.18
SHROOM3-209ENST00000490690 RAB4BP61018 213 aa13.93□□□□□ -0.18
SHROOM3-209ENST00000490690 KCNIP4Q6PIL6 250 aa13.93□□□□□ -0.18
SHROOM3-209ENST00000490690 NUP35Q8NFH5 326 aa13.93□□□□□ -0.18
SHROOM3-209ENST00000490690 ICOSQ9Y6W8 199 aa13.93□□□□□ -0.18
SHROOM3-209ENST00000490690 MUC21A0A0G2JKD1 596 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 MUC21A0A140T8X8 626 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 H7C1H1 209 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 APOC3P02656 99 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 SSTP61278 116 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 MRPL23Q16540 153 aaKnown RBP13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 UFSP1Q6NVU6 142 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 ATP5L2Q7Z4Y8 100 aa13.92□□□□□ -0.18
SHROOM3-209ENST00000490690 A0A087WWL8 130 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 TRBV10-1A0A0K0K1A3 114 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 K7EQD1 137 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 S100PP25815 95 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 ZNF56Q15929 161 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 C14orf178Q8N769 122 aaPredicted RBP13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 FRZBQ92765 325 aa13.91□□□□□ -0.18
SHROOM3-209ENST00000490690 TRAV9-1A0A075B6T8 112 aa13.9□□□□□ -0.18
SHROOM3-209ENST00000490690 A0A0J9YY99 117 aa13.9□□□□□ -0.18
SHROOM3-209ENST00000490690 SAMD10Q9BYL1 202 aa13.9□□□□□ -0.18
SHROOM3-209ENST00000490690 JPT2Q9H910 190 aa13.9□□□□□ -0.18
SHROOM3-209ENST00000490690 APLNQ9ULZ1 77 aa13.9□□□□□ -0.18
SHROOM3-209ENST00000490690 IGHV3-73A0A0B4J1V6 119 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 F5H697 171 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 NUDT3O95989 172 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 P0DMU3 169 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 FAM231AP0DMU4 169 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 FAM231CP0DMU5 169 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 SRIP30626 198 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 SLC25A29Q8N8R3 303 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 VSIG2Q96IQ7 327 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 BTF3L4Q96K17 158 aa13.89□□□□□ -0.19
SHROOM3-209ENST00000490690 C7orf77A4D0Y5 90 aa13.88□□□□□ -0.19
SHROOM3-209ENST00000490690 EVI2AP22794 236 aa13.88□□□□□ -0.19
SHROOM3-209ENST00000490690 TMEM191AQ9H0A3 160 aa13.88□□□□□ -0.19
SHROOM3-209ENST00000490690 MSRB1Q9NZV6 116 aa13.88□□□□□ -0.19
SHROOM3-209ENST00000490690 MGPP08493 103 aa13.87□□□□□ -0.19
SHROOM3-209ENST00000490690 GYPEP15421 78 aa13.87□□□□□ -0.19
SHROOM3-209ENST00000490690 HBBP68871 147 aa13.87□□□□□ -0.19
SHROOM3-209ENST00000490690 RPS10P5Q9NQ39 176 aa13.87□□□□□ -0.19
SHROOM3-209ENST00000490690 KIF25-AS1Q9Y6Z4 181 aa13.87□□□□□ -0.19
SHROOM3-209ENST00000490690 CCL18P55774 89 aa13.86□□□□□ -0.19
SHROOM3-209ENST00000490690 FAM3BP58499 235 aaPredicted RBP13.86□□□□□ -0.19
SHROOM3-209ENST00000490690 RPL36AP83881 106 aaKnown RBP13.86□□□□□ -0.19
SHROOM3-209ENST00000490690 NEGR1Q7Z3B1 354 aa13.86□□□□□ -0.19
SHROOM3-209ENST00000490690 SLC7A5P1Q8MH63 180 aa13.86□□□□□ -0.19
SHROOM3-209ENST00000490690 RPL36ALQ969Q0 106 aaKnown RBP13.86□□□□□ -0.19
SHROOM3-209ENST00000490690 RASL11AQ6T310 242 aa13.85□□□□□ -0.19
SHROOM3-209ENST00000490690 LGALS9CQ6DKI2 356 aa13.84□□□□□ -0.19
SHROOM3-209ENST00000490690 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
SHROOM3-209ENST00000490690 A0A096LPF7 62 aa13.83□□□□□ -0.2
SHROOM3-209ENST00000490690 PPP1R17O96001 155 aa13.83□□□□□ -0.2
SHROOM3-209ENST00000490690 LINC00315P59091 139 aa13.83□□□□□ -0.2
SHROOM3-209ENST00000490690 COX19Q49B96 90 aa13.82□□□□□ -0.2
SHROOM3-209ENST00000490690 MRPL54Q6P161 138 aaKnown RBP13.82□□□□□ -0.2
SHROOM3-209ENST00000490690 UBE2DNLQ8IWF7 75 aa13.82□□□□□ -0.2
SHROOM3-209ENST00000490690 TRBV7-3A0A075B6L6 115 aa13.81□□□□□ -0.2
SHROOM3-209ENST00000490690 A0A1B0GXF2 115 aa13.81□□□□□ -0.2
SHROOM3-209ENST00000490690 CAMPP49913 170 aa13.81□□□□□ -0.2
SHROOM3-209ENST00000490690 TIRAPP58753 221 aa13.81□□□□□ -0.2
SHROOM3-209ENST00000490690 MRAP2Q96G30 205 aa13.81□□□□□ -0.2
SHROOM3-209ENST00000490690 SUMO4Q6EEV6 95 aa13.8□□□□□ -0.2
SHROOM3-209ENST00000490690 Q6ZSN1 163 aa13.8□□□□□ -0.2
SHROOM3-209ENST00000490690 GATD1Q8NB37 220 aa13.8□□□□□ -0.2
SHROOM3-209ENST00000490690 TNFRSF18Q9Y5U5 241 aa13.8□□□□□ -0.2
SHROOM3-209ENST00000490690 M0QY20 66 aa13.79□□□□□ -0.2
SHROOM3-209ENST00000490690 TMEM97Q5BJF2 176 aa13.79□□□□□ -0.2
SHROOM3-209ENST00000490690 ATP6V0E2Q8NHE4 81 aa13.79□□□□□ -0.2
SHROOM3-209ENST00000490690 NIT2Q9NQR4 276 aa13.79□□□□□ -0.2
SHROOM3-209ENST00000490690 NACAE9PAV3 2078 aa13.79□□□□□ -0.2
SHROOM3-209ENST00000490690 CSMD3Q7Z407 3707 aa13.78□□□□□ -0.2
SHROOM3-209ENST00000490690 DYNC2H1Q8NCM8 4307 aaKnown RBP13.78□□□□□ -0.2
SHROOM3-209ENST00000490690 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
SHROOM3-209ENST00000490690 GAGE1Q13065 139 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms