RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 HHLA3Q9XRX5 114 aa3.62□□□□□ -1.83
SHTN1-205ENST00000490615 MOB4Q9Y3A3 225 aa3.62□□□□□ -1.83
SHTN1-205ENST00000490615 ATG2BQ96BY7 2078 aa3.62□□□□□ -1.83
SHTN1-205ENST00000490615 TNRC6BQ9UPQ9 1833 aaKnown RBP3.62□□□□□ -1.83
SHTN1-205ENST00000490615 ARID1AO14497 2285 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 TDRD6O60522 2096 aaKnown RBP3.61□□□□□ -1.83
SHTN1-205ENST00000490615 SHANK1Q9Y566 2161 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 GOLGA4Q13439 2230 aaKnown RBP3.61□□□□□ -1.83
SHTN1-205ENST00000490615 TRBV25-1A0A075B6N4 114 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 IGHV3-43A0A0B4J1X8 118 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 TRAV3A0A0B4J244 114 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 D6R8Y8 96 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 K7EMI3 77 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 TMEM256-PLSCR3K7ERE1 68 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 TCL1BO95988 128 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 SCGB1C2P0DMR2 95 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 IGHV3-43DP0DP04 118 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 IFI27P40305 119 aaPredicted RBP3.61□□□□□ -1.83
SHTN1-205ENST00000490615 ZNF138P52744 262 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 SNRPD3P62318 126 aaKnown RBP3.61□□□□□ -1.83
SHTN1-205ENST00000490615 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
SHTN1-205ENST00000490615 RPL39P5Q59GN2 51 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 MDP1Q86V88 176 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 TMEM167AQ8TBQ9 72 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 LINC00479Q96M42 142 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 LITAFQ99732 161 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 CHCHD5Q9BSY4 110 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 NDUFA4L2Q9NRX3 87 aa3.61□□□□□ -1.83
SHTN1-205ENST00000490615 F11RQ9Y624 299 aaKnown RBP3.61□□□□□ -1.83
SHTN1-205ENST00000490615 EXPH5Q8NEV8 1989 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 DYSFO75923 2080 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 TRAV12-1A0A0B4J245 112 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 IGHV1-69DA0A0B4J2H0 117 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 MYMXA0A1B0GTQ4 84 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 K7EM74 188 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 IGKV3-20P01619 116 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 SAA2P0DJI9 122 aaPredicted RBP3.6□□□□□ -1.83
SHTN1-205ENST00000490615 FXYD2P54710 66 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 HERVK_113P61574 105 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 NPC2P61916 151 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 PDE6HQ13956 83 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 CFAP126Q5VTH2 177 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 FAM57AQ8TBR7 257 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 KLF14Q8TD94 323 aaPredicted RBP3.6□□□□□ -1.83
SHTN1-205ENST00000490615 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 UPK3BQ9BT76 320 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 LINC00574Q9H8X3 128 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 DHRS4-AS1Q9P1J3 65 aa3.6□□□□□ -1.83
SHTN1-205ENST00000490615 IGKV1OR2-108A0A075B7D4 117 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 IGHV3OR16-13A0A075B7E8 117 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 IGHV5-10-1A0A0J9YXX1 117 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 SRRM5B3KS81 715 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 BUB1B-PAK6H3BSN5 160 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 PPP1R17O96001 155 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 NPYP01303 97 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 ARMS2P0C7Q2 107 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 SLC25A16P16260 332 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 PATE2Q6UY27 113 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 SH2D6Q7Z4S9 175 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 C3orf56Q8N813 242 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 Q8N8P6 123 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 VSIG2Q96IQ7 327 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 TIMM17AQ99595 171 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 HCFC1P51610 2035 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 DOCK8Q8NF50 2099 aa3.59□□□□□ -1.83
SHTN1-205ENST00000490615 ALPK2Q86TB3 2170 aa3.59□□□□□ -1.84
SHTN1-205ENST00000490615 KIAA2026Q5HYC2 2103 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 A0A096LNJ9 63 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 SOCS3O14543 225 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 SAA1P0DJI8 122 aaPredicted RBP3.58□□□□□ -1.84
SHTN1-205ENST00000490615 CGB3P0DN86 165 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 CGB7P0DN87 165 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 HIST1H4AP62805 103 aaKnown RBP3.58□□□□□ -1.84
SHTN1-205ENST00000490615 MRPL51Q4U2R6 128 aaKnown RBP3.58□□□□□ -1.84
SHTN1-205ENST00000490615 ORMDL2Q53FV1 153 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 LYZL1Q6UWQ5 148 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 ZNF833PQ6ZTB9 187 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 GPHB5Q86YW7 130 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 CD177Q8N6Q3 437 aa3.58□□□□□ -1.84
SHTN1-205ENST00000490615 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 TRBV7-3A0A075B6L6 115 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 IGKV1D-37A0A075B6S9 117 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 LOC107984156A0A0G2JMH3 177 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 F8VRH5 84 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 K7ERJ3 54 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 LINC01565O15544 149 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 INAFM2P0DMQ5 153 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 RNASE4P34096 147 aaKnown RBP3.57□□□□□ -1.84
SHTN1-205ENST00000490615 CRIP2P52943 208 aaPredicted RBP3.57□□□□□ -1.84
SHTN1-205ENST00000490615 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 DOCK11Q5JSL3 2073 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 LINC00322Q6ZN03 302 aaPredicted RBP3.57□□□□□ -1.84
SHTN1-205ENST00000490615 ZNF826PQ6ZT77 177 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 ARL17AQ8IVW1 177 aa3.57□□□□□ -1.84
SHTN1-205ENST00000490615 CSNK1G2-AS1Q8NCQ2 148 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms