RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 HIGD1CA8MV81 97 aa11.95□□□□□ -0.5
RAPGEF3-212ENST00000490387 PPP1R2P9O14990 202 aa11.95□□□□□ -0.5
RAPGEF3-212ENST00000490387 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
RAPGEF3-212ENST00000490387 SPANXN1Q5VSR9 72 aa11.95□□□□□ -0.5
RAPGEF3-212ENST00000490387 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
RAPGEF3-212ENST00000490387 F5H768 121 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 MT-ND4LP03901 98 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 CRYGDP07320 174 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 ZFP2Q6ZN57 461 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 ANAPC16Q96DE5 110 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 FAM210BQ96KR6 192 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 MSRB1Q9NZV6 116 aa11.94□□□□□ -0.5
RAPGEF3-212ENST00000490387 CIDEAO60543 219 aa11.93□□□□□ -0.5
RAPGEF3-212ENST00000490387 NUP35Q8NFH5 326 aa11.93□□□□□ -0.5
RAPGEF3-212ENST00000490387 PGLYRP4Q96LB8 373 aa11.93□□□□□ -0.5
RAPGEF3-212ENST00000490387 GATA1P15976 413 aaPredicted RBP11.92□□□□□ -0.5
RAPGEF3-212ENST00000490387 NTF3P20783 257 aa11.92□□□□□ -0.5
RAPGEF3-212ENST00000490387 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
RAPGEF3-212ENST00000490387 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
RAPGEF3-212ENST00000490387 KIF25-AS1Q9Y6Z4 181 aa11.92□□□□□ -0.5
RAPGEF3-212ENST00000490387 A0A087WWL8 130 aa11.91□□□□□ -0.5
RAPGEF3-212ENST00000490387 RHODO00212 210 aa11.91□□□□□ -0.5
RAPGEF3-212ENST00000490387 SSTP61278 116 aa11.91□□□□□ -0.5
RAPGEF3-212ENST00000490387 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
RAPGEF3-212ENST00000490387 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
RAPGEF3-212ENST00000490387 AP1S3Q96PC3 154 aa11.91□□□□□ -0.5
RAPGEF3-212ENST00000490387 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 TRAV26-1A0A087WT03 109 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 TRGV4A0A0C4DH28 118 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 A0A1B0GUT8 65 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 H3BNG1 76 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 CRYBA4P53673 196 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 LINC00315P59091 139 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 SLAQ13239 276 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 Q6ZSN1 163 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 HHLA3Q9XRX5 114 aa11.9□□□□□ -0.5
RAPGEF3-212ENST00000490387 IGHV3-73A0A0B4J1V6 119 aa11.89□□□□□ -0.51
RAPGEF3-212ENST00000490387 C7orf77A4D0Y5 90 aa11.89□□□□□ -0.51
RAPGEF3-212ENST00000490387 APOC3P02656 99 aa11.89□□□□□ -0.51
RAPGEF3-212ENST00000490387 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF3-212ENST00000490387 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
RAPGEF3-212ENST00000490387 A0A087WWC5 75 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 EVI2AP22794 236 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 RHEBQ15382 184 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 TWIST1Q15672 202 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 FAM74A4Q5TZK3 123 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 SVBPQ8N300 66 aa11.88□□□□□ -0.51
RAPGEF3-212ENST00000490387 A0A0J9YY99 117 aa11.87□□□□□ -0.51
RAPGEF3-212ENST00000490387 TRBV6-4A0A1B0GX49 114 aa11.87□□□□□ -0.51
RAPGEF3-212ENST00000490387 SLC25A29Q8N8R3 303 aa11.87□□□□□ -0.51
RAPGEF3-212ENST00000490387 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
RAPGEF3-212ENST00000490387 TMEM242Q9NWH2 141 aa11.87□□□□□ -0.51
RAPGEF3-212ENST00000490387 PAX4O43316 350 aa11.86□□□□□ -0.51
RAPGEF3-212ENST00000490387 C15orf53Q8NAA6 179 aa11.86□□□□□ -0.51
RAPGEF3-212ENST00000490387 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
RAPGEF3-212ENST00000490387 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 A0A1B0GXF2 115 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 SNAPINO95295 136 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 P0DMU3 169 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 FAM3BP58499 235 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 RAB4BP61018 213 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 RIGQ13278 110 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 DPH3P1Q9H4G8 78 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 DNAH6Q9C0G6 4158 aa11.85□□□□□ -0.51
RAPGEF3-212ENST00000490387 K7EQD1 137 aa11.84□□□□□ -0.51
RAPGEF3-212ENST00000490387 SMIM17P0DL12 118 aa11.84□□□□□ -0.51
RAPGEF3-212ENST00000490387 RHOHQ15669 191 aa11.84□□□□□ -0.51
RAPGEF3-212ENST00000490387 TMEM191AQ9H0A3 160 aa11.84□□□□□ -0.51
RAPGEF3-212ENST00000490387 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
RAPGEF3-212ENST00000490387 A0A096LPF7 62 aa11.83□□□□□ -0.52
RAPGEF3-212ENST00000490387 LOC100131303A0A0U1RQF7 123 aa11.83□□□□□ -0.52
RAPGEF3-212ENST00000490387 A0A1B0GW15 77 aa11.83□□□□□ -0.52
RAPGEF3-212ENST00000490387 ZNF56Q15929 161 aa11.83□□□□□ -0.52
RAPGEF3-212ENST00000490387 ATP5L2Q7Z4Y8 100 aa11.83□□□□□ -0.52
RAPGEF3-212ENST00000490387 Q9UF83 564 aa11.83□□□□□ -0.52
RAPGEF3-212ENST00000490387 LINC00694P0DN24 101 aa11.82□□□□□ -0.52
RAPGEF3-212ENST00000490387 GYPEP15421 78 aa11.82□□□□□ -0.52
RAPGEF3-212ENST00000490387 GATD1Q8NB37 220 aa11.82□□□□□ -0.52
RAPGEF3-212ENST00000490387 PRADC1Q9BSG0 188 aa11.82□□□□□ -0.52
RAPGEF3-212ENST00000490387 NUDT3O95989 172 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 MGPP08493 103 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 HBBP68871 147 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 MRPL54Q6P161 138 aaKnown RBP11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
RAPGEF3-212ENST00000490387 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 TRBV10-1A0A0K0K1A3 114 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 F5H697 171 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 M0QY20 66 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 UBE2DNLQ8IWF7 75 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 RNF185Q96GF1 192 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
RAPGEF3-212ENST00000490387 DNAH10Q8IVF4 4471 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms