RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 GYPBP06028 91 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 CECR9P0C854 216 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 LINC00694P0DN24 101 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 CRYGAP11844 174 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 PSMB8P28062 276 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 GCHFRP30047 84 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 HERVK_113P63121 156 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 CD164Q04900 197 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 WFDC2Q14508 124 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 INSL4Q14641 139 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF141Q15928 474 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 SP6Q3SY56 376 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TDRG1Q3Y452 100 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 VMA21Q3ZAQ7 101 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 ORMDL2Q53FV1 153 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 MRPL2Q5T653 305 aaKnown RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 SPINT4Q6UDR6 99 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 C2orf82Q6UX34 121 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF826PQ6ZT77 177 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 LINC00305Q7Z4B0 112 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 RPS19BP1Q86WX3 136 aaKnown RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 ORMDL3Q8N138 153 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 FAM19A2Q8N3H0 131 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 UBE2WQ96B02 151 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 ARHGAP5-AS1Q96IT6 56 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 AGPAT4-IT1Q9H0P7 198 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 VSIRQ9H7M9 311 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 FAM60AQ9NP50 221 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 IDI2-AS1Q9NZ38 188 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 ANAPC10Q9UM13 185 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 EPDR1Q9UM22 224 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TP53TG1Q9Y2A0 90 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TIMM8BQ9Y5J9 83 aaPredicted RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 SERP1Q9Y6X1 66 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 FLNBO75369 2602 aaKnown RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 USP24Q9UPU5 2620 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 LAMA2P24043 3122 aaKnown RBP1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TRPM6Q9BX84 2022 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 DENND4CQ5VZ89 1909 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 SIP14410 1827 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 TANC2Q9HCD6 1990 aa1.38□□□□□ -2.19
HMGN1-218ENST00000490032 OBSL1O75147 1896 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 ANKRD11Q6UB99 2663 aaPredicted RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 FANCMQ8IYD8 2048 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 VWA8A3KMH1 1905 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV19A0A075B6N1 114 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 IGHV3OR16-8A0A075B7F1 116 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV3A0A0B4J244 114 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 A0A0B4J2E0 115 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 LOC107984640A0A0U1RRK4 108 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 A0A1B0GX12 115 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 A0A1W2PPV9 198 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 C2orf70A6NJV1 201 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 SOCS1O15524 211 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 SLC25A20O43772 301 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 PGLYRP1O75594 196 aaPredicted RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 DNAL4O96015 105 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 IGLV3-25P01717 112 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 P0DMU3 169 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 FAM231AP0DMU4 169 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 FAM231CP0DMU5 169 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 PDE6GP18545 87 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 CSRP1P21291 193 aaKnown RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 CCL1P22362 96 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 PRTN3P24158 256 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 IFI27P40305 119 aaPredicted RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 FOXA3P55318 350 aaPredicted RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 EDDM3BP56851 147 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 DAD1P61803 113 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 SUPT4H1P63272 117 aaKnown RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 FOXF1Q12946 379 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF77Q15935 545 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 TMEM155Q4W5P6 130 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 ATP5EP2Q5VTU8 51 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 MIC13Q5XKP0 118 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 C22orf39Q6P5X5 142 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 RPP25LQ8N5L8 163 aaKnown RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 SERP2Q8N6R1 65 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 NPWQ8N729 165 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 CIRBP-AS1Q8TBR5 109 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 FAM57AQ8TBR7 257 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 DPH3Q96FX2 82 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 ZNF488Q96MN9 340 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 NPCDR1Q9BY65 106 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 RPUSD1Q9UJJ7 312 aaKnown RBP1.37□□□□□ -2.19
HMGN1-218ENST00000490032 PLXNA4Q9HCM2 1894 aa1.37□□□□□ -2.19
HMGN1-218ENST00000490032 MAST4O15021 2626 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 SPTBN2O15020 2390 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 KIAA1671Q9BY89 1806 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 EML5Q05BV3 1969 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 EXPH5Q8NEV8 1989 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV20OR9-2A0A075B6H5 130 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV25-1A0A075B6N4 114 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 IGHV3OR15-7A0A075B7D8 119 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 A0A0A6YYD5 115 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TRAV17A0A0B4J275 112 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV30A0A0K0K1B3 111 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV7-7A0A0K0K1E9 115 aa1.36□□□□□ -2.19
HMGN1-218ENST00000490032 TRBV10-2A0A0K0K1G8 114 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms