RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	SAMD10	Q9BYL1	202 aa		7.59	□□□□□ -1.2
GGA1-222	ENST00000489772	KRTAP9-2	Q9BYQ4	174 aa		7.59	□□□□□ -1.2
GGA1-222	ENST00000489772	JPT2	Q9H910	190 aa		7.59	□□□□□ -1.2
GGA1-222	ENST00000489772	RAB19	A4D1S5	217 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	TIRAP	P58753	221 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	FAM74A4	Q5TZK3	123 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	UFSP1	Q6NVU6	142 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772		Q6ZSN1	163 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	SFRP2	Q96HF1	295 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	LY96	Q9Y6Y9	160 aa		7.58	□□□□□ -1.2
GGA1-222	ENST00000489772	PKD1	P98161	4303 aa		7.57	□□□□□ -1.2
GGA1-222	ENST00000489772		A0A087WWL8	130 aa		7.57	□□□□□ -1.2
GGA1-222	ENST00000489772		K7EP13	123 aa		7.57	□□□□□ -1.2
GGA1-222	ENST00000489772	EVI2A	P22794	236 aa		7.57	□□□□□ -1.2
GGA1-222	ENST00000489772	WFDC10B	Q8IUB3	73 aa		7.57	□□□□□ -1.2
GGA1-222	ENST00000489772	BIN3	Q9NQY0	253 aa		7.57	□□□□□ -1.2
GGA1-222	ENST00000489772	TRAV8-6	A0A0B4J262	113 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	GAGE12J	A6NER3	117 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	IGLV2-8	P01709	118 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	CRYGD	P07320	174 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	OR5AL1	P0C617	328 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	DNAH10OS	P0CZ25	163 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	LINC00315	P59091	139 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	RPS20	P60866	119 aa	Known RBP	7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	TNP2	Q05952	138 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	GAGE1	Q13065	139 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	GAGE4	Q13068	117 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	GAGE5	Q13069	117 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	GAGE13	Q4V321	117 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	SPANXN1	Q5VSR9	72 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	ATP6V0E2	Q8NHE4	81 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	LYPD6B	Q8NI32	183 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	GTSF1L	Q9H1H1	148 aa		7.56	□□□□□ -1.2
GGA1-222	ENST00000489772	PKHD1	P08F94	4074 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	XKRY2	A2RUG3	117 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	RBFOX3	A6NFN3	312 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	SNAI2	O43623	268 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772		P01737	135 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	OR10J3	Q5JRS4	329 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	LELP1	Q5T871	98 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	C14orf178	Q8N769	122 aa	Predicted RBP	7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	OR2D3	Q8NGH3	330 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	OR10AG1	Q8NH19	301 aa		7.55	□□□□□ -1.2
GGA1-222	ENST00000489772	TRBV20OR9-2	A0A075B6H5	130 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	IGHV3-38	A0A0C4DH36	116 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	MUC21	A0A0G2JKD1	596 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	MUC21	A0A140T8X8	626 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	KRTAP9-6	A0A140TA67	174 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	C19orf71	A6NCJ1	209 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	SST	P61278	116 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	NFE4	Q86UQ8	179 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	C10orf126	Q8N4M7	172 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	TPPP3	Q9BW30	176 aa		7.54	□□□□□ -1.2
GGA1-222	ENST00000489772	TRBV10-1	A0A0K0K1A3	114 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	TMEM250	H0YL14	139 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	SMIM17	P0DL12	118 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	LINC00694	P0DN24	101 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	GZMB	P10144	247 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	RAB4B	P61018	213 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	FER1L6-AS1	Q8NA97	138 aa		7.53	□□□□□ -1.2
GGA1-222	ENST00000489772	DNAH11	Q96DT5	4516 aa		7.52	□□□□□ -1.2
GGA1-222	ENST00000489772		A0A087WWC5	75 aa		7.52	□□□□□ -1.21
GGA1-222	ENST00000489772	ZNF56	Q15929	161 aa		7.52	□□□□□ -1.21
GGA1-222	ENST00000489772	LINC01556	Q5JQF7	62 aa		7.52	□□□□□ -1.21
GGA1-222	ENST00000489772	EIF5A2	Q9GZV4	153 aa	Known RBP	7.52	□□□□□ -1.21
GGA1-222	ENST00000489772	MSRB1	Q9NZV6	116 aa		7.52	□□□□□ -1.21
GGA1-222	ENST00000489772		Q9UF83	564 aa		7.52	□□□□□ -1.21
GGA1-222	ENST00000489772		F2Z2F3	143 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772		F5H697	171 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	IGLC6	P0CF74	106 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	CEBPG	P53567	150 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	CACNG7	P62955	275 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	RPL36A	P83881	106 aa	Known RBP	7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	TOR2A	Q5JU69	321 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	NUDT10	Q8NFP7	164 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	OCC1	Q8TAD7	63 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	RPL36AL	Q969Q0	106 aa	Known RBP	7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	NUDT11	Q96G61	164 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	AP1S3	Q96PC3	154 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	TNFRSF18	Q9Y5U5	241 aa		7.51	□□□□□ -1.21
GGA1-222	ENST00000489772	TRBV7-3	A0A075B6L6	115 aa		7.5	□□□□□ -1.21
GGA1-222	ENST00000489772		Q6ZRN7	208 aa	Predicted RBP	7.5	□□□□□ -1.21
GGA1-222	ENST00000489772	C16orf90	A8MZG2	172 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772		K7EN84	100 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	EREG	O14944	169 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	NDUFS6	O75380	124 aa	Known RBP	7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	IGHV3-30	P01768	117 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	IGHV3-33	P01772	117 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	IGHV3-30-3	P0DP02	117 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	IGHV3-30-5	P0DP03	117 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	OR10G8	Q8NGN5	311 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	FAM210A	Q96ND0	272 aa		7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	RNASE7	Q9H1E1	156 aa	Known RBP	7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	RPP21	Q9H633	154 aa	Known RBP	7.49	□□□□□ -1.21
GGA1-222	ENST00000489772	IBA57-AS1	B1ANH7	110 aa		7.48	□□□□□ -1.21
GGA1-222	ENST00000489772	ERVFC1-1	P60608	527 aa		7.48	□□□□□ -1.21
GGA1-222	ENST00000489772	UBE2D3	P61077	147 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms