RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CRYGDP07320 174 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 ESRGQ1W209 222 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 TMEM241Q24JQ0 296 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 ZNRF2Q8NHG8 242 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 RNASE7Q9H1E1 156 aaKnown RBP7.66□□□□□ -1.18
CPSF7-212ENST00000489728 OSTCQ9NRP0 149 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 NAT8Q9UHE5 227 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
CPSF7-212ENST00000489728 DNAH6Q9C0G6 4158 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 TRBV10-1A0A0K0K1A3 114 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 A8MWL6 223 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 GATCO43716 136 aaKnown RBP7.65□□□□□ -1.18
CPSF7-212ENST00000489728 ERVFC1-1P60608 527 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 RAB4BP61018 213 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 SOHLH1Q5JUK2 328 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 SAMD10Q9BYL1 202 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 GFRA4Q9GZZ7 299 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 JPT2Q9H910 190 aa7.65□□□□□ -1.18
CPSF7-212ENST00000489728 IGHV3-73A0A0B4J1V6 119 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 C9JQL5 133 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 TRGC1P0CF51 173 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 GZMBP10144 247 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 FOXA3P55318 350 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-212ENST00000489728 SRSF3P84103 164 aaKnown RBP7.64□□□□□ -1.19
CPSF7-212ENST00000489728 IFITM2Q01629 132 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 TTC32Q5I0X7 151 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 FAM74A4Q5TZK3 123 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 LYPD5Q6UWN5 251 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 C15orf54Q8N8G6 183 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 TPPP3Q9BW30 176 aa7.64□□□□□ -1.19
CPSF7-212ENST00000489728 A0A087WWL8 130 aa7.63□□□□□ -1.19
CPSF7-212ENST00000489728 K7EP13 123 aa7.63□□□□□ -1.19
CPSF7-212ENST00000489728 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
CPSF7-212ENST00000489728 BTF3P20290 206 aaKnown RBP7.63□□□□□ -1.19
CPSF7-212ENST00000489728 LYZL1Q6UWQ5 148 aa7.63□□□□□ -1.19
CPSF7-212ENST00000489728 Q6ZR54 194 aa7.63□□□□□ -1.19
CPSF7-212ENST00000489728 ISOC2Q96AB3 205 aa7.63□□□□□ -1.19
CPSF7-212ENST00000489728 KMT2AQ03164 3969 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 LOC100131303A0A0U1RQF7 123 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 NBDYA0A0U1RRE5 68 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
CPSF7-212ENST00000489728 ZNF56Q15929 161 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 UQCC3Q6UW78 93 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 Q6ZSN1 163 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 TSKUQ8WUA8 353 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 Q9H8V8 135 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 KIF25-AS1Q9Y6Z4 181 aa7.62□□□□□ -1.19
CPSF7-212ENST00000489728 A0A087WWC5 75 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 SIVA1O15304 175 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 NTF3P20783 257 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 RPL36AP83881 106 aaKnown RBP7.61□□□□□ -1.19
CPSF7-212ENST00000489728 PNRC1Q12796 327 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-212ENST00000489728 ADIRFQ15847 76 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 C14orf178Q8N769 122 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-212ENST00000489728 OR10G8Q8NGN5 311 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 ATP6V0E2Q8NHE4 81 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 GTSF1Q8WW33 167 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 RPL36ALQ969Q0 106 aaKnown RBP7.61□□□□□ -1.19
CPSF7-212ENST00000489728 BORCS7Q96B45 105 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 GTSF1LQ9H1H1 148 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 V9GYV3 84 aa7.61□□□□□ -1.19
CPSF7-212ENST00000489728 IGLV2-18A0A075B6J9 118 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 H7C1H1 209 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 LINC00315P59091 139 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 LELP1Q5T871 98 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 DPH3P1Q9H4G8 78 aa7.6□□□□□ -1.19
CPSF7-212ENST00000489728 TRBV7-3A0A075B6L6 115 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 GAGE12JA6NER3 117 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 GAGE1Q13065 139 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 GAGE4Q13068 117 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 GAGE5Q13069 117 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 TWIST1Q15672 202 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 GAGE13Q4V321 117 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 LINC00336Q6ZUF6 198 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 SMIM15Q7Z3B0 74 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-212ENST00000489728 FRZBQ92765 325 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 MSRB1Q9NZV6 116 aa7.59□□□□□ -1.19
CPSF7-212ENST00000489728 TRAV9-2A0A087WT02 112 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 TRAV8-6A0A0B4J262 113 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 A0A1B0GUT8 65 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 F5H697 171 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 EVI2AP22794 236 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 UBE2D3P61077 147 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 UBE2D2P62837 147 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 DNAJC30Q96LL9 226 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
CPSF7-212ENST00000489728 SMIM27A0A1W2PRY6 76 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 M0QY20 66 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 M0R2N4 97 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 MGPP08493 103 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 SSTP61278 116 aa7.57□□□□□ -1.2
CPSF7-212ENST00000489728 TMEM97Q5BJF2 176 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms