RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 RBFOX3A6NFN3 312 aa13.03□□□□□ -0.32
APTX-229ENST00000489583 IGLV2-11P01706 119 aa13.03□□□□□ -0.32
APTX-229ENST00000489583 LAGE3Q14657 143 aa13.03□□□□□ -0.32
APTX-229ENST00000489583 TOR2AQ5JU69 321 aa13.03□□□□□ -0.32
APTX-229ENST00000489583 CFAP126Q5VTH2 177 aa13.03□□□□□ -0.32
APTX-229ENST00000489583 LINC00479Q96M42 142 aa13.03□□□□□ -0.32
APTX-229ENST00000489583 SRRM2Q9UQ35 2752 aaKnown RBP13.03□□□□□ -0.32
APTX-229ENST00000489583 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.33
APTX-229ENST00000489583 ZFP30Q9Y2G7 519 aa13.02□□□□□ -0.33
APTX-229ENST00000489583 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
APTX-229ENST00000489583 RS1O15537 224 aa13.01□□□□□ -0.33
APTX-229ENST00000489583 SMUG1Q53HV7 270 aa13.01□□□□□ -0.33
APTX-229ENST00000489583 Q86TA4 180 aa13.01□□□□□ -0.33
APTX-229ENST00000489583 C11orf52Q96A22 123 aa13.01□□□□□ -0.33
APTX-229ENST00000489583 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
APTX-229ENST00000489583 GCGP01275 180 aa13□□□□□ -0.33
APTX-229ENST00000489583 S100A4P26447 101 aaKnown RBP13□□□□□ -0.33
APTX-229ENST00000489583 MED9Q9NWA0 146 aa13□□□□□ -0.33
APTX-229ENST00000489583 COX11Q9Y6N1 276 aa13□□□□□ -0.33
APTX-229ENST00000489583 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
APTX-229ENST00000489583 ZNF506Q5JVG8 444 aa12.99□□□□□ -0.33
APTX-229ENST00000489583 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
APTX-229ENST00000489583 FAM210AQ96ND0 272 aa12.99□□□□□ -0.33
APTX-229ENST00000489583 LTAP01374 205 aa12.98□□□□□ -0.33
APTX-229ENST00000489583 RMI2Q96E14 147 aa12.98□□□□□ -0.33
APTX-229ENST00000489583 A0A087WWC5 75 aa12.97□□□□□ -0.33
APTX-229ENST00000489583 RPL35P42766 123 aaKnown RBP12.97□□□□□ -0.33
APTX-229ENST00000489583 BAGE2Q86Y30 109 aa12.97□□□□□ -0.33
APTX-229ENST00000489583 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
APTX-229ENST00000489583 A8MWV9 139 aa12.96□□□□□ -0.33
APTX-229ENST00000489583 TMEM250H0YL14 139 aa12.96□□□□□ -0.33
APTX-229ENST00000489583 NDUFS6O75380 124 aaKnown RBP12.96□□□□□ -0.33
APTX-229ENST00000489583 KCNIP4Q6PIL6 250 aa12.96□□□□□ -0.33
APTX-229ENST00000489583 PTH2Q96A98 100 aa12.96□□□□□ -0.33
APTX-229ENST00000489583 FAT1Q14517 4588 aa12.96□□□□□ -0.34
APTX-229ENST00000489583 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
APTX-229ENST00000489583 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 PGPEP1LA6NFU8 196 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 GNG4P50150 75 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 GAGE1Q13065 139 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 GAGE4Q13068 117 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 GAGE5Q13069 117 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 PEA15Q15121 130 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 GAGE13Q4V321 117 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 CLLU1Q5K131 121 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 ZFP2Q6ZN57 461 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
APTX-229ENST00000489583 FLG2Q5D862 2391 aaPredicted RBP12.93□□□□□ -0.34
APTX-229ENST00000489583 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.93□□□□□ -0.34
APTX-229ENST00000489583 ASIPP42127 132 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 IFITM2Q01629 132 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 SYT8Q8NBV8 401 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 SMIM12Q96EX1 92 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 DERL1Q9BUN8 251 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 SMDT1Q9H4I9 107 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 FAM30AQ9NZY2 134 aa12.93□□□□□ -0.34
APTX-229ENST00000489583 LECT2O14960 151 aa12.92□□□□□ -0.34
APTX-229ENST00000489583 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
APTX-229ENST00000489583 CEBPGP53567 150 aa12.92□□□□□ -0.34
APTX-229ENST00000489583 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
APTX-229ENST00000489583 MYCBP2O75592 4640 aa12.92□□□□□ -0.34
APTX-229ENST00000489583 ZNF674Q2M3X9 581 aa12.91□□□□□ -0.34
APTX-229ENST00000489583 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
APTX-229ENST00000489583 Q8N976 141 aa12.91□□□□□ -0.34
APTX-229ENST00000489583 PARLQ9H300 379 aa12.91□□□□□ -0.34
APTX-229ENST00000489583 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
APTX-229ENST00000489583 C11orf21Q9P2W6 132 aa12.91□□□□□ -0.34
APTX-229ENST00000489583 RAB19A4D1S5 217 aa12.9□□□□□ -0.34
APTX-229ENST00000489583 RNASE3P12724 160 aaKnown RBP12.9□□□□□ -0.34
APTX-229ENST00000489583 MLST8Q9BVC4 326 aa12.9□□□□□ -0.34
APTX-229ENST00000489583 RHODO00212 210 aa12.89□□□□□ -0.35
APTX-229ENST00000489583 SH2D1AO60880 128 aa12.89□□□□□ -0.35
APTX-229ENST00000489583 SRP19P09132 144 aaKnown RBP12.89□□□□□ -0.35
APTX-229ENST00000489583 ELOBQ15370 118 aa12.89□□□□□ -0.35
APTX-229ENST00000489583 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
APTX-229ENST00000489583 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
APTX-229ENST00000489583 IGKV2D-24A0A075B6R9 120 aa12.88□□□□□ -0.35
APTX-229ENST00000489583 A0A087WX48 190 aa12.88□□□□□ -0.35
APTX-229ENST00000489583 PRR27Q6MZM9 219 aa12.88□□□□□ -0.35
APTX-229ENST00000489583 BAALCQ8WXS3 180 aa12.88□□□□□ -0.35
APTX-229ENST00000489583 DAZAP1Q96EP5 407 aaKnown RBP12.88□□□□□ -0.35
APTX-229ENST00000489583 B4DEV8 164 aa12.87□□□□□ -0.35
APTX-229ENST00000489583 CRIP1P50238 77 aa12.87□□□□□ -0.35
APTX-229ENST00000489583 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
APTX-229ENST00000489583 ZNF727A8MUV8 499 aa12.86□□□□□ -0.35
APTX-229ENST00000489583 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
APTX-229ENST00000489583 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
APTX-229ENST00000489583 Q6ZSA8 131 aa12.86□□□□□ -0.35
APTX-229ENST00000489583 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
APTX-229ENST00000489583 KRTAP29-1A8MX34 341 aaPredicted RBP12.85□□□□□ -0.35
APTX-229ENST00000489583 WFDC2Q14508 124 aa12.85□□□□□ -0.35
APTX-229ENST00000489583 Q8N3U1 123 aa12.85□□□□□ -0.35
APTX-229ENST00000489583 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
APTX-229ENST00000489583 TRBV20OR9-2A0A075B6H5 130 aa12.84□□□□□ -0.35
APTX-229ENST00000489583 IGKV3D-20A0A0C4DH25 116 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms