RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 SPANXN1Q5VSR9 72 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 C20orf144Q9BQM9 153 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 CNFNQ9BYD5 112 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 MSRB1Q9NZV6 116 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 XCL2Q9UBD3 114 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 PHLDA3Q9Y5J5 127 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 ANK2Q01484 3957 aa5.64□□□□□ -1.51
SMC6-209ENST00000489535 VWFP04275 2813 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 IGHV3-16A0A0C4DH30 117 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 LOC105371267A0A1B0GV96 52 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 M0R381 172 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 SRIP30626 198 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 SNRPEP62304 92 aaKnown RBP5.63□□□□□ -1.51
SMC6-209ENST00000489535 MORN3Q6PF18 240 aaPredicted RBP5.63□□□□□ -1.51
SMC6-209ENST00000489535 ZNF493Q6ZR52 646 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 LINC01587Q99440 93 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 TMEM208Q9BTX3 173 aa5.63□□□□□ -1.51
SMC6-209ENST00000489535 IGHV4-4A0A075B6R2 117 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 IGHV3OR16-12A0A075B7B8 117 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 LOC102724200A0A096LPH7 203 aaPredicted RBP5.62□□□□□ -1.51
SMC6-209ENST00000489535 C5orf52A6NGY3 159 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 HTN1P15515 57 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 FAM104BQ5XKR9 115 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 SMIM15Q7Z3B0 74 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 AMN1Q8IY45 258 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 TMEM256Q8N2U0 113 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 C9orf85Q96MD7 179 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 C1QTNF4Q9BXJ3 329 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 TMEM191AQ9H0A3 160 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 SCRT2Q9NQ03 307 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 MDFICQ9P1T7 246 aa5.62□□□□□ -1.51
SMC6-209ENST00000489535 PRM2P04554 102 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 IGKV2-30P06310 120 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 ZNF415Q09FC8 603 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 C1orf158Q8N1D5 194 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 LINC00467Q9BRT7 94 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 ALKBH7Q9BT30 221 aaPredicted RBP5.61□□□□□ -1.51
SMC6-209ENST00000489535 GOLT1BQ9Y3E0 138 aa5.61□□□□□ -1.51
SMC6-209ENST00000489535 MAST4O15021 2626 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 B5MCH6 92 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 D6R8Y8 96 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 UBE2CO00762 179 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 NXPH4O95158 308 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 GIG44P09565 113 aaPredicted RBP5.6□□□□□ -1.51
SMC6-209ENST00000489535 RAB4AP20338 218 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 EVI2AP22794 236 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 Q0VG73 95 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 MRPL51Q4U2R6 128 aaKnown RBP5.6□□□□□ -1.51
SMC6-209ENST00000489535 OR10J3Q5JRS4 329 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 C18orf32Q8TCD1 76 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 RNF185Q96GF1 192 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 AP1S3Q96PC3 154 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 CSTL1Q9H114 145 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 DPH3P1Q9H4G8 78 aa5.6□□□□□ -1.51
SMC6-209ENST00000489535 SMKR1H3BMG3 65 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 NCR2O95944 276 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 MGPP08493 103 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 SMIM17P0DL12 118 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 AZU1P20160 251 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 CKS2P33552 79 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 COA6Q5JTJ3 125 aaKnown RBP5.59□□□□□ -1.51
SMC6-209ENST00000489535 BAGE3Q86Y29 109 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 CSNK1G2-AS1Q8NCQ2 148 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 PRELID3AQ96N28 172 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 RCHY1Q96PM5 261 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 JPT2Q9H910 190 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 GSN-AS1Q9NRJ2 163 aa5.59□□□□□ -1.51
SMC6-209ENST00000489535 STAB1Q9NY15 2570 aa5.59□□□□□ -1.52
SMC6-209ENST00000489535 G3V4G9 280 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 M0R2P5 195 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 SERF1AO75920 110 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 S100A2P29034 98 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 EGFEM1PQ0D2K5 195 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 HIST3H2BBQ8N257 126 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 C14orf178Q8N769 122 aaPredicted RBP5.58□□□□□ -1.52
SMC6-209ENST00000489535 C11orf72Q8NBR9 251 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 SPXQ9BT56 116 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 U3KQK5 164 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 NOTCH3Q9UM47 2321 aa5.58□□□□□ -1.52
SMC6-209ENST00000489535 A0A087WWL8 130 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 NUPR1O60356 82 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 NPYP01303 97 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 IGHV4-30-4P0DP06 118 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 APOC4P55056 127 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 ZNF876PQ49A33 203 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
SMC6-209ENST00000489535 RNASE8Q8TDE3 154 aaKnown RBP5.57□□□□□ -1.52
SMC6-209ENST00000489535 TMEM263Q8WUH6 116 aaKnown RBP5.57□□□□□ -1.52
SMC6-209ENST00000489535 MRAP2Q96G30 205 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 C16orf74Q96GX8 76 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 MRPL16Q9NX20 251 aaKnown RBP5.57□□□□□ -1.52
SMC6-209ENST00000489535 ZMAT5Q9UDW3 170 aaKnown RBP5.57□□□□□ -1.52
SMC6-209ENST00000489535 KIF25-AS1Q9Y6Z4 181 aa5.57□□□□□ -1.52
SMC6-209ENST00000489535 TRAV26-2A0A0B4J265 109 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 KIR2DL5BA0A0G2JN68 375 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 KIR2DL5BA0A0G2JPC4 375 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms