RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 USH2AO75445 5202 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 TRAV8-1A0A0A6YYK1 113 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 C19orf71A6NCJ1 209 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 HIGD1CA8MV81 97 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 BUB3O43684 328 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 SPINK4O60575 86 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 APCSP02743 223 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 RPS20P60866 119 aaKnown RBP5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 FAM106AQ4KMX7 169 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 Q6AWC8 147 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 BAGE3Q86Y29 109 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 OR2D3Q8NGH3 330 aa5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 MRPL53Q96EL3 112 aaKnown RBP5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 PACRGQ96M98 296 aaPredicted RBP5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
EXOSC3-206ENST00000489414 IGHV3OR16-8A0A075B7F1 116 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 A0A1B0GW15 77 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 RBAKDNA6NC62 111 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 M0R3E3 92 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 CHEK1O14757 476 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 EIF4EBP3O60516 100 aaPredicted RBP5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 IGLV2-11P01706 119 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 HBBP68871 147 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 S100A12P80511 92 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 OR10J3Q5JRS4 329 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 FAM162BQ5T6X4 162 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 SAMD13Q5VXD3 122 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 TMEM136Q6ZRR5 245 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 NUP35Q8NFH5 326 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 NEU1Q99519 415 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 NIT2Q9NQR4 276 aa5.08□□□□□ -1.6
EXOSC3-206ENST00000489414 IGKV2-40A0A087WW87 121 aaPredicted RBP5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 TMEM189A5PLL7 270 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 PCP4L1A6NKN8 68 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 A8MWP6 167 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 NPIPB6E9PJ23 425 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 ZNF207O43670 478 aaKnown RBP5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 IGKV2D-40P01614 121 aaPredicted RBP5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 GIG44P09565 113 aaPredicted RBP5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 PAFAH1B2P68402 229 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 Q0VG73 95 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 RIGQ13278 110 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 DNLZQ5SXM8 178 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 TMEM78Q5T7P6 136 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 GFI1BQ5VTD9 330 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 C16orf54Q6UWD8 224 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 NTN5Q8WTR8 489 aaPredicted RBP5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 ZC2HC1AQ96GY0 325 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 PGLYRP4Q96LB8 373 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 C16orf92Q96LL3 132 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 HIST1H2BLQ99880 126 aa5.07□□□□□ -1.6
EXOSC3-206ENST00000489414 FCGBPQ9Y6R7 5405 aaPredicted RBP5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 IGHV3-49A0A0A0MS15 119 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 IGHV3-66A0A0C4DH42 116 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 A0A1B0GUT8 65 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 HTN3P15516 51 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 CAMPP49913 170 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 RPL11P62913 178 aaKnown RBP5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 TCF24Q7RTU0 167 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 SAMD10Q9BYL1 202 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 DAZ1Q9NQZ3 744 aaKnown RBP5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 UFC1Q9Y3C8 167 aa5.06□□□□□ -1.6
EXOSC3-206ENST00000489414 IGHV3OR16-13A0A075B7E8 117 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 IGHV3-74A0A0B4J1X5 117 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 GRIFINA4D1Z8 144 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 IFITM10A6NMD0 228 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 FABP5P3A8MUU1 101 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 K7EMT4 169 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 SH2D1AO60880 128 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 SPART-AS1P0CW21 52 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 SRIP30626 198 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 ID1P41134 155 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 ZNF138P52744 262 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 RPL37AP61513 92 aaKnown RBP5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 COX8CQ7Z4L0 72 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 ZNF738Q8NE65 137 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 OR10J6PQ8NGY7 276 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 GLMPQ8WWB7 406 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 C8orf49Q96NF6 230 aa5.05□□□□□ -1.6
EXOSC3-206ENST00000489414 IGHV7-4-1A0A0J9YVY3 117 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 A0A1B0GXF2 115 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 ZNF705FA8MVS1 300 aaPredicted RBP5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 SERF1AO75920 110 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 APOHP02749 345 aaPredicted RBP5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 ORM1P02763 201 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 ESDP10768 282 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 FOXA3P55318 350 aaPredicted RBP5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 HIST1H1AQ02539 215 aaPredicted RBP5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 JOSD1Q15040 202 aaPredicted RBP5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 IQCJQ1A5X6 159 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 KIAA1644Q3SXP7 199 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 PYY3Q5JQD4 70 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 IGFL4Q6B9Z1 124 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 GPHB5Q86YW7 130 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 TMEM256Q8N2U0 113 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 RNF182Q8N6D2 247 aa5.04□□□□□ -1.6
EXOSC3-206ENST00000489414 GTSF1Q8WW33 167 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms