RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 GCGP01275 180 aa8.92□□□□□ -0.98
UFD1-209ENST00000489406 CRYGAP11844 174 aa8.92□□□□□ -0.98
UFD1-209ENST00000489406 CMTM2Q8TAZ6 248 aa8.92□□□□□ -0.98
UFD1-209ENST00000489406 MIXL1Q9H2W2 232 aa8.92□□□□□ -0.98
UFD1-209ENST00000489406 FGF7P21781 194 aa8.91□□□□□ -0.98
UFD1-209ENST00000489406 CYCSP99999 105 aaKnown RBP8.91□□□□□ -0.98
UFD1-209ENST00000489406 OR10G8Q8NGN5 311 aa8.91□□□□□ -0.98
UFD1-209ENST00000489406 AP3S1Q92572 193 aa8.91□□□□□ -0.98
UFD1-209ENST00000489406 A0A1W2PNN7 141 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 BCAP31P51572 246 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 RAB2AP61019 212 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 UBE2L3P68036 154 aaKnown RBP8.9□□□□□ -0.98
UFD1-209ENST00000489406 SPANXN2Q5MJ10 180 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 RETNLBQ9BQ08 111 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 NDFIP1Q9BT67 221 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 VCX3BQ9H321 246 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 OR5AC2Q9NZP5 309 aa8.9□□□□□ -0.98
UFD1-209ENST00000489406 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
UFD1-209ENST00000489406 AMTP48728 403 aa8.89□□□□□ -0.99
UFD1-209ENST00000489406 C20orf203Q8NBC4 194 aa8.89□□□□□ -0.99
UFD1-209ENST00000489406 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
UFD1-209ENST00000489406 MCFD2Q8NI22 146 aa8.89□□□□□ -0.99
UFD1-209ENST00000489406 LYRM2Q9NU23 88 aaPredicted RBP8.89□□□□□ -0.99
UFD1-209ENST00000489406 GSKIPQ9P0R6 139 aa8.89□□□□□ -0.99
UFD1-209ENST00000489406 L7N2F9 121 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 VAMP2P63027 116 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 IL18Q14116 193 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 CTF1Q16619 201 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 IAH1Q2TAA2 248 aaPredicted RBP8.88□□□□□ -0.99
UFD1-209ENST00000489406 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
UFD1-209ENST00000489406 MITD1Q8WV92 249 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 SFRP2Q96HF1 295 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
UFD1-209ENST00000489406 IGKV3D-20A0A0C4DH25 116 aa8.87□□□□□ -0.99
UFD1-209ENST00000489406 H3BVH4 76 aa8.87□□□□□ -0.99
UFD1-209ENST00000489406 RGS5O15539 181 aa8.87□□□□□ -0.99
UFD1-209ENST00000489406 GNG5P63218 68 aa8.87□□□□□ -0.99
UFD1-209ENST00000489406 PRR27Q6MZM9 219 aa8.87□□□□□ -0.99
UFD1-209ENST00000489406 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
UFD1-209ENST00000489406 IGLV4-60A0A075B6I1 120 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 GVQW2A0A096LPI5 108 aaPredicted RBP8.86□□□□□ -0.99
UFD1-209ENST00000489406 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
UFD1-209ENST00000489406 OR11H4Q8NGC9 324 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 DERL1Q9BUN8 251 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 IL36BQ9NZH7 164 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 PHLDA3Q9Y5J5 127 aa8.86□□□□□ -0.99
UFD1-209ENST00000489406 C9orf170A2RU37 121 aa8.85□□□□□ -0.99
UFD1-209ENST00000489406 PTTG1IPP53801 180 aa8.85□□□□□ -0.99
UFD1-209ENST00000489406 EIF5AP63241 154 aaKnown RBP8.85□□□□□ -0.99
UFD1-209ENST00000489406 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
UFD1-209ENST00000489406 TMEM97Q5BJF2 176 aa8.85□□□□□ -0.99
UFD1-209ENST00000489406 FAM74A1Q5RGS3 127 aa8.85□□□□□ -0.99
UFD1-209ENST00000489406 KRTAP4-1Q9BYQ7 146 aa8.85□□□□□ -0.99
UFD1-209ENST00000489406 CTDSP2O14595 271 aa8.84□□□□□ -0.99
UFD1-209ENST00000489406 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
UFD1-209ENST00000489406 SULT1A2P50226 295 aa8.84□□□□□ -0.99
UFD1-209ENST00000489406 SMUG1Q53HV7 270 aa8.84□□□□□ -0.99
UFD1-209ENST00000489406 LINC00526Q96FQ7 95 aa8.84□□□□□ -0.99
UFD1-209ENST00000489406 S100A11P31949 105 aa8.83□□□□□ -1
UFD1-209ENST00000489406 FUNDC2Q9BWH2 189 aa8.83□□□□□ -1
UFD1-209ENST00000489406 LSM5Q9Y4Y9 91 aaKnown RBP8.83□□□□□ -1
UFD1-209ENST00000489406 TRBV6-1A0A0K0K1D8 114 aa8.82□□□□□ -1
UFD1-209ENST00000489406 M0R381 172 aa8.82□□□□□ -1
UFD1-209ENST00000489406 ZFP69Q49AA0 526 aa8.82□□□□□ -1
UFD1-209ENST00000489406 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
UFD1-209ENST00000489406 CARD19Q96LW7 228 aa8.82□□□□□ -1
UFD1-209ENST00000489406 SLC25A21Q9BQT8 299 aaPredicted RBP8.82□□□□□ -1
UFD1-209ENST00000489406 MBD2Q9UBB5 411 aa8.82□□□□□ -1
UFD1-209ENST00000489406 CARHSP1Q9Y2V2 147 aaKnown RBP8.82□□□□□ -1
UFD1-209ENST00000489406 IGLV7-46A0A075B6I9 117 aa8.81□□□□□ -1
UFD1-209ENST00000489406 A0A087WZ39 114 aa8.81□□□□□ -1
UFD1-209ENST00000489406 EIF3GO75821 320 aaKnown RBP eCLIP8.81□□□□□ -1
UFD1-209ENST00000489406 FAUP35544 74 aaKnown RBP8.81□□□□□ -1
UFD1-209ENST00000489406 IQCJQ1A5X6 159 aa8.81□□□□□ -1
UFD1-209ENST00000489406 PSG8Q9UQ74 426 aa8.81□□□□□ -1
UFD1-209ENST00000489406 TRAV6A0A075B6T7 132 aa8.8□□□□□ -1
UFD1-209ENST00000489406 IGHV1-24A0A0C4DH33 117 aa8.8□□□□□ -1
UFD1-209ENST00000489406 IGKV3OR2-268A0A0C4DH90 116 aa8.8□□□□□ -1
UFD1-209ENST00000489406 A6NJY4 79 aa8.8□□□□□ -1
UFD1-209ENST00000489406 SULT1A1P50225 295 aa8.8□□□□□ -1
UFD1-209ENST00000489406 RAB4BP61018 213 aa8.8□□□□□ -1
UFD1-209ENST00000489406 ZNF56Q15929 161 aa8.8□□□□□ -1
UFD1-209ENST00000489406 THAP6Q8TBB0 222 aa8.8□□□□□ -1
UFD1-209ENST00000489406 AQP10Q96PS8 301 aa8.8□□□□□ -1
UFD1-209ENST00000489406 A0A1B0GUV1 79 aa8.79□□□□□ -1
UFD1-209ENST00000489406 GRIFINA4D1Z8 144 aa8.79□□□□□ -1
UFD1-209ENST00000489406 CFC1BP0CG36 223 aa8.79□□□□□ -1
UFD1-209ENST00000489406 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
UFD1-209ENST00000489406 PRNTQ86SH4 94 aa8.79□□□□□ -1
UFD1-209ENST00000489406 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
UFD1-209ENST00000489406 IGSF23A1L1A6 192 aa8.78□□□□□ -1
UFD1-209ENST00000489406 B4DEV8 164 aa8.78□□□□□ -1
UFD1-209ENST00000489406 HBG1P69891 147 aa8.78□□□□□ -1
UFD1-209ENST00000489406 HBG2P69892 147 aa8.78□□□□□ -1
UFD1-209ENST00000489406 ATP6V1FQ16864 119 aa8.78□□□□□ -1
UFD1-209ENST00000489406 KHDC3LQ587J8 217 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms