RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 LINC01565O15544 149 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 PPP1R17O96001 155 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 COX6CP09669 75 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 ZNF883P0CG24 379 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 LGALS3P17931 250 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 Q1RN00 199 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 ZNF876PQ49A33 203 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 DAND5Q8N907 189 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 DCANP1Q8TF63 244 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 UPK3BQ9BT76 320 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 RNF7Q9UBF6 113 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 CACNA1GO43497 2377 aa3.56□□□□□ -1.84
CDC42BPA-213ENST00000488131 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 LYZL6O75951 148 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 TRACP01848 142 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 SPINK14Q6IE38 97 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 MUSTN1Q8IVN3 82 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 LITAFQ99732 161 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 PRO0628Q9UI54 55 aa3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 ZNF256Q9Y2P7 627 aaPredicted RBP3.55□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGLV3-9A0A075B6K5 115 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV1-18A0A0C4DH31 117 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 hADV29S1A0JD25 119 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 EPM2AB3EWF7 344 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 NDUFC2-KCTD14E9PQ53 114 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV1-69P01742 117 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 RPL18AQ02543 176 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 DYNAPQ8N1N2 210 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 MRPL53Q96EL3 112 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 DPH3P1Q9H4G8 78 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 COL6A3P12111 3177 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 TRBV7-1A0A0A6YYK4 115 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 LY6LH3BQJ8 138 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 H7C2G1 150 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 NTN3O00634 580 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 UBE2E1P51965 193 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 PROK1P58294 105 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 CCL8P80075 99 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 FAM222AQ5U5X8 452 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 SPANXN1Q5VSR9 72 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 SERP2Q8N6R1 65 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 CCL13Q99616 98 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 TIMM21Q9BVV7 248 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 HES7Q9BYE0 225 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 CYSTM1Q9H1C7 97 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 DYNLRB1Q9NP97 96 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
CDC42BPA-213ENST00000488131 DNAJC13O75165 2243 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 PLXNB1O43157 2135 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 CACNA1EQ15878 2313 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 A0A087WW49 117 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 A0A0J9YXY3 114 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 NXPH4O95158 308 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 PRB4P10163 310 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 CCL3L1P16619 93 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 DLX1P56177 255 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 HRCT1Q6UXD1 115 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 GFRALQ6UXV0 394 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 TMEM61Q8N0U2 210 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 FAM19A4Q96LR4 140 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 RNF5Q99942 180 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 JPT2Q9H910 190 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 SPRR3Q9UBC9 169 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 TP53TG1Q9Y2A0 90 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 PYGO1Q9Y3Y4 419 aa3.53□□□□□ -1.84
CDC42BPA-213ENST00000488131 CDH23Q9H251 3354 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 REV3LO60673 3130 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 J3QLI3 93 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 EDN2P20800 178 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 C9orf47Q6ZRZ4 202 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 MDS2Q8NDY4 140 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 SAP25Q8TEE9 199 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 CLEC2BQ92478 149 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 LENEPQ9Y5L5 61 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 COL27A1Q8IZC6 1860 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 ARFGEF3Q5TH69 2177 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGLV11-55A0A075B6I3 123 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRAV13-1A0A0B4J241 112 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 PRAC2D3DTV9 90 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 I3L3M4 83 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 TIMM17BO60830 172 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 APELAP0DMC3 54 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 INAFM2P0DMQ5 153 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 CCL4P13236 92 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 PSMB8P28062 276 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 MIAQ16674 131 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 Q6JHZ5 121 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 ASCL5Q7RTU5 278 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 DSCR8Q96T75 97 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 PIMREGQ9BSJ6 248 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 SLC25A15Q9Y619 301 aa3.52□□□□□ -1.85
CDC42BPA-213ENST00000488131 FAM186AA6NE01 2351 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRGV5A0A0B4J1U4 118 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRAV41A0A0B4J266 112 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRBV27A0A0K0K1C4 114 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms