RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 DNAH11Q96DT5 4516 aa16.08■□□□□ 0.16
RNF38-208ENST00000488058 CENPWQ5EE01 88 aa16.08■□□□□ 0.16
RNF38-208ENST00000488058 NFE4Q86UQ8 179 aa16.08■□□□□ 0.16
RNF38-208ENST00000488058 GTSF1LQ9H1H1 148 aa16.08■□□□□ 0.16
RNF38-208ENST00000488058 LELP1Q5T871 98 aa16.07■□□□□ 0.16
RNF38-208ENST00000488058 HERC2O95714 4834 aa16.06■□□□□ 0.16
RNF38-208ENST00000488058 K7EP13 123 aa16.06■□□□□ 0.16
RNF38-208ENST00000488058 MEF2BQ02080 365 aaPredicted RBP16.06■□□□□ 0.16
RNF38-208ENST00000488058 C10orf126Q8N4M7 172 aa16.06■□□□□ 0.16
RNF38-208ENST00000488058 Q9UF83 564 aa16.06■□□□□ 0.16
RNF38-208ENST00000488058 IGHV3-30P01768 117 aa16.05■□□□□ 0.16
RNF38-208ENST00000488058 IGHV3-33P01772 117 aa16.05■□□□□ 0.16
RNF38-208ENST00000488058 IGHV3-30-3P0DP02 117 aa16.05■□□□□ 0.16
RNF38-208ENST00000488058 IGHV3-30-5P0DP03 117 aa16.05■□□□□ 0.16
RNF38-208ENST00000488058 OR10AG1Q8NH19 301 aa16.05■□□□□ 0.16
RNF38-208ENST00000488058 MED9Q9NWA0 146 aa16.05■□□□□ 0.16
RNF38-208ENST00000488058 MUC21A0A0G2JKD1 596 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 MUC21A0A140T8X8 626 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 RAB19A4D1S5 217 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 PDE6DO43924 150 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 CXCL1P09341 107 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 BCL2P10415 239 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 ERVFC1-1P60608 527 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 SSTP61278 116 aa16.04■□□□□ 0.16
RNF38-208ENST00000488058 LINC00694P0DN24 101 aa16.03■□□□□ 0.16
RNF38-208ENST00000488058 KRTAP10-2P60368 255 aa16.03■□□□□ 0.16
RNF38-208ENST00000488058 LINC01556Q5JQF7 62 aa16.03■□□□□ 0.16
RNF38-208ENST00000488058 KRTAP17-1Q9BYP8 105 aa16.03■□□□□ 0.16
RNF38-208ENST00000488058 EREGO14944 169 aa16.02■□□□□ 0.16
RNF38-208ENST00000488058 GNG4P50150 75 aa16.02■□□□□ 0.16
RNF38-208ENST00000488058 SPANXN1Q5VSR9 72 aa16.02■□□□□ 0.16
RNF38-208ENST00000488058 ALKAL2Q6UX46 152 aa16.02■□□□□ 0.16
RNF38-208ENST00000488058 DAZAP1Q96EP5 407 aaKnown RBP16.02■□□□□ 0.16
RNF38-208ENST00000488058 VAX2Q9UIW0 290 aa16.02■□□□□ 0.16
RNF38-208ENST00000488058 BOLA1Q9Y3E2 137 aa16.02■□□□□ 0.16
RNF38-208ENST00000488058 SNAI2O43623 268 aa16■□□□□ 0.15
RNF38-208ENST00000488058 IGLV2-8P01709 118 aa16■□□□□ 0.15
RNF38-208ENST00000488058 ZNF56Q15929 161 aa16■□□□□ 0.15
RNF38-208ENST00000488058 OR5AL1P0C617 328 aa15.99■□□□□ 0.15
RNF38-208ENST00000488058 OR2D3Q8NGH3 330 aa15.99■□□□□ 0.15
RNF38-208ENST00000488058 TPPP3Q9BW30 176 aa15.99■□□□□ 0.15
RNF38-208ENST00000488058 Q9HAA7 133 aa15.99■□□□□ 0.15
RNF38-208ENST00000488058 GZMBP10144 247 aa15.98■□□□□ 0.15
RNF38-208ENST00000488058 SSBP4Q9BWG4 385 aaPredicted RBP15.98■□□□□ 0.15
RNF38-208ENST00000488058 PSCAO43653 123 aa15.97■□□□□ 0.15
RNF38-208ENST00000488058 FUSP35637 526 aaKnown RBP eCLIP15.97■□□□□ 0.15
RNF38-208ENST00000488058 TAGLN2P37802 199 aaKnown RBP15.97■□□□□ 0.15
RNF38-208ENST00000488058 NKX2-5P52952 324 aaPredicted RBP15.97■□□□□ 0.15
RNF38-208ENST00000488058 RPL36AP83881 106 aaKnown RBP15.97■□□□□ 0.15
RNF38-208ENST00000488058 RPL36ALQ969Q0 106 aaKnown RBP15.97■□□□□ 0.15
RNF38-208ENST00000488058 SMIM12Q96EX1 92 aa15.97■□□□□ 0.15
RNF38-208ENST00000488058 TRBV20OR9-2A0A075B6H5 130 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 A0A087WTM6 91 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 A0A087WWC5 75 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 A0A1B0GVG6 124 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 IBA57-AS1B1ANH7 110 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 RPS20P60866 119 aaKnown RBP15.96■□□□□ 0.15
RNF38-208ENST00000488058 BLOC1S1P78537 153 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 Q8N3U1 123 aa15.96■□□□□ 0.15
RNF38-208ENST00000488058 TRBV10-1A0A0K0K1A3 114 aa15.95■□□□□ 0.14
RNF38-208ENST00000488058 RBFOX3A6NFN3 312 aa15.95■□□□□ 0.14
RNF38-208ENST00000488058 F5H697 171 aa15.95■□□□□ 0.14
RNF38-208ENST00000488058 P01737 135 aa15.95■□□□□ 0.14
RNF38-208ENST00000488058 RAB4BP61018 213 aa15.95■□□□□ 0.14
RNF38-208ENST00000488058 C19orf71A6NCJ1 209 aa15.94■□□□□ 0.14
RNF38-208ENST00000488058 SMIM17P0DL12 118 aa15.94■□□□□ 0.14
RNF38-208ENST00000488058 FER1L6-AS1Q8NA97 138 aa15.94■□□□□ 0.14
RNF38-208ENST00000488058 BIN3Q9NQY0 253 aa15.94■□□□□ 0.14
RNF38-208ENST00000488058 AP1S3Q96PC3 154 aa15.93■□□□□ 0.14
RNF38-208ENST00000488058 TRBV7-3A0A075B6L6 115 aa15.92■□□□□ 0.14
RNF38-208ENST00000488058 PGPEP1Q9NXJ5 209 aa15.92■□□□□ 0.14
RNF38-208ENST00000488058 XKRY2A2RUG3 117 aa15.91■□□□□ 0.14
RNF38-208ENST00000488058 IGLC6P0CF74 106 aa15.91■□□□□ 0.14
RNF38-208ENST00000488058 UBE2D3P61077 147 aa15.91■□□□□ 0.14
RNF38-208ENST00000488058 UBE2D2P62837 147 aa15.91■□□□□ 0.14
RNF38-208ENST00000488058 DAZ4Q86SG3 579 aaKnown RBP15.91■□□□□ 0.14
RNF38-208ENST00000488058 DAZ3Q9NR90 486 aaKnown RBP15.91■□□□□ 0.14
RNF38-208ENST00000488058 URGCP-MRPS24S4R325 110 aa15.91■□□□□ 0.14
RNF38-208ENST00000488058 CDK2AP2O75956 126 aa15.9■□□□□ 0.14
RNF38-208ENST00000488058 NEXN-AS1Q8NBZ9 246 aa15.9■□□□□ 0.14
RNF38-208ENST00000488058 MGPP08493 103 aa15.89■□□□□ 0.13
RNF38-208ENST00000488058 OR10G8Q8NGN5 311 aa15.89■□□□□ 0.13
RNF38-208ENST00000488058 CEBPGP53567 150 aa15.88■□□□□ 0.13
RNF38-208ENST00000488058 CACNG7P62955 275 aa15.88■□□□□ 0.13
RNF38-208ENST00000488058 LAGE3Q14657 143 aa15.88■□□□□ 0.13
RNF38-208ENST00000488058 NUDT10Q8NFP7 164 aa15.88■□□□□ 0.13
RNF38-208ENST00000488058 NUDT11Q96G61 164 aa15.88■□□□□ 0.13
RNF38-208ENST00000488058 CDPF1Q6NVV7 123 aa15.87■□□□□ 0.13
RNF38-208ENST00000488058 OCC1Q8TAD7 63 aa15.87■□□□□ 0.13
RNF38-208ENST00000488058 KIF25-AS1Q9Y6Z4 181 aa15.87■□□□□ 0.13
RNF38-208ENST00000488058 TOR2AQ5JU69 321 aa15.86■□□□□ 0.13
RNF38-208ENST00000488058 LYZL1Q6UWQ5 148 aa15.86■□□□□ 0.13
RNF38-208ENST00000488058 NIT1Q86X76 327 aa15.86■□□□□ 0.13
RNF38-208ENST00000488058 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.86■□□□□ 0.13
RNF38-208ENST00000488058 RNASE7Q9H1E1 156 aaKnown RBP15.86■□□□□ 0.13
RNF38-208ENST00000488058 RYR1P21817 5038 aa15.86■□□□□ 0.13
RNF38-208ENST00000488058 F2Z2F3 143 aa15.85■□□□□ 0.13
RNF38-208ENST00000488058 K7EN84 100 aa15.85■□□□□ 0.13
RNF38-208ENST00000488058 KCNIP4Q6PIL6 250 aa15.85■□□□□ 0.13
RNF38-208ENST00000488058 LYPD6BQ8NI32 183 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms