RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 SEC11CQ9BY50 192 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 RNASE7Q9H1E1 156 aaKnown RBP4.63□□□□□ -1.67
PTPRE-209ENST00000487428 KIF25-AS1Q9Y6Z4 181 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 V9GYV3 84 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 SACSQ9NZJ4 4579 aa4.63□□□□□ -1.67
PTPRE-209ENST00000487428 A0A096LPF7 62 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 TRGV4A0A0C4DH28 118 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 GRIFINA4D1Z8 144 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 PPP1R2P9O14990 202 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 PAX4O43316 350 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 GATCO43716 136 aaKnown RBP4.62□□□□□ -1.67
PTPRE-209ENST00000487428 SFTA3P0C7M3 94 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 TRGC1P0CF51 173 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 LINC00315P59091 139 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 ERVFC1-1P60608 527 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 RAB4BP61018 213 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 SPANXN1Q5VSR9 72 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 GTSF1Q8WW33 167 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 ANAPC16Q96DE5 110 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 AP1S3Q96PC3 154 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 PRADC1Q9BSG0 188 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 ICOSQ9Y6W8 199 aa4.62□□□□□ -1.67
PTPRE-209ENST00000487428 A0A1B0GW15 77 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 SMIM27A0A1W2PRY6 76 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 TMEM218A2RU14 115 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 K7EQD1 137 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 HTN3P15516 51 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 CCL18P55774 89 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 LYZL1Q6UWQ5 148 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 NEGR1Q7Z3B1 354 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 SLC25A29Q8N8R3 303 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 IMMP2LQ96T52 175 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 TMEM242Q9NWH2 141 aa4.61□□□□□ -1.67
PTPRE-209ENST00000487428 CARHSP1Q9Y2V2 147 aaKnown RBP4.61□□□□□ -1.67
PTPRE-209ENST00000487428 MRPS16Q9Y3D3 137 aaKnown RBP4.61□□□□□ -1.67
PTPRE-209ENST00000487428 TMSB15BA0A087X1C1 80 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 A0A1B0GUT8 65 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 HIGD1CA8MV81 97 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 M0R381 172 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 NTF3P20783 257 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 GATD1Q8NB37 220 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 DNAJC30Q96LL9 226 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 SAMD10Q9BYL1 202 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 TMEM191AQ9H0A3 160 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 DPH3P1Q9H4G8 78 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 NAT8BQ9UHF3 227 aa4.6□□□□□ -1.67
PTPRE-209ENST00000487428 TRBV7-3A0A075B6L6 115 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 TRAV9-1A0A075B6T8 112 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 A0A087WWC5 75 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 H7C1H1 209 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 MT-ND4LP03901 98 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 GYPEP15421 78 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 ADCYAP1P18509 176 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 SRIP30626 198 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 CEBPGP53567 150 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 ADIRFQ15847 76 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 ESRGQ1W209 222 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 TMEM97Q5BJF2 176 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 Q6ZR54 194 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 ATP5L2Q7Z4Y8 100 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 ZNRF2Q8NHG8 242 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 CTDSP1Q9GZU7 261 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 JPT2Q9H910 190 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 LINC00588Q9Y4M8 146 aa4.59□□□□□ -1.67
PTPRE-209ENST00000487428 A0A0J9YY99 117 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 M0QY20 66 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 ATP6V1G1O75348 118 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 NUDT3O95989 172 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 S100A8P05109 93 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 SMIM17P0DL12 118 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 GZMBP10144 247 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 EVI2AP22794 236 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 UBE2D3P61077 147 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 UBE2D2P62837 147 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 RPL36AP83881 106 aaKnown RBP4.58□□□□□ -1.68
PTPRE-209ENST00000487428 RIGQ13278 110 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 RASL11AQ6T310 242 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 LYPD5Q6UWN5 251 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 Q6ZSN1 163 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 SMIM15Q7Z3B0 74 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 COMMD7Q86VX2 200 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 C14orf178Q8N769 122 aaPredicted RBP4.58□□□□□ -1.68
PTPRE-209ENST00000487428 NUP35Q8NFH5 326 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 RPL36ALQ969Q0 106 aaKnown RBP4.58□□□□□ -1.68
PTPRE-209ENST00000487428 BORCS7Q96B45 105 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 PGLYRP4Q96LB8 373 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 GTSF1LQ9H1H1 148 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 MSRB1Q9NZV6 116 aa4.58□□□□□ -1.68
PTPRE-209ENST00000487428 A0A087WWL8 130 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 TRBV6-5A0A0K0K1A5 114 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 F8W036 122 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 LY6G6CO95867 125 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 PPP1R17O96001 155 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 DNAH10OSP0CZ25 163 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 RHEBQ15382 184 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 TWIST1Q15672 202 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 LELP1Q5T871 98 aa4.57□□□□□ -1.68
PTPRE-209ENST00000487428 FAM74A4Q5TZK3 123 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms