RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 IGKV3D-20A0A0C4DH25 116 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 FAM74A7A6NL05 159 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 B4DEV8 164 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 FAM74A3Q4VXF1 159 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 CLRN3Q8NCR9 226 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 PARLQ9H300 379 aa8.37□□□□□ -1.07
SREBF1-215ENST00000487401 GAGE12JA6NER3 117 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 SNAPINO95295 136 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 XGP55808 180 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 GAGE1Q13065 139 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 GAGE4Q13068 117 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 GAGE5Q13069 117 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 GAGE13Q4V321 117 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 Q6ZSN1 163 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 Q86TA4 180 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
SREBF1-215ENST00000487401 FAT1Q14517 4588 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 IGLV5-52A0A0A0MRZ9 124 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 UBE2G1P62253 170 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
SREBF1-215ENST00000487401 FMC1Q96HJ9 113 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 TM2D2Q9BX73 214 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 IL36BQ9NZH7 164 aa8.35□□□□□ -1.07
SREBF1-215ENST00000487401 GRIFINA4D1Z8 144 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 H3BVH4 76 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 M0R036 132 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 SH2D1AO60880 128 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 ARMS2P0C7Q2 107 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 CRIP1P50238 77 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 PEA15Q15121 130 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 FAM162BQ5T6X4 162 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 CST9LP1Q5W188 147 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 FRZBQ92765 325 aa8.34□□□□□ -1.07
SREBF1-215ENST00000487401 A0A087WWC5 75 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 RHODO00212 210 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 ZC2HC1AQ96GY0 325 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 TCEAL7Q9BRU2 100 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 SAMD10Q9BYL1 202 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 JPT2Q9H910 190 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 PHLDA3Q9Y5J5 127 aa8.33□□□□□ -1.08
SREBF1-215ENST00000487401 TMSB15BA0A087X1C1 80 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 UMAD1C9J7I0 102 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 C9JQL5 133 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 FHITP49789 147 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 LAGE3Q14657 143 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 UFSP1Q6NVU6 142 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 C14orf178Q8N769 122 aaPredicted RBP8.32□□□□□ -1.08
SREBF1-215ENST00000487401 Q8N814 137 aa8.32□□□□□ -1.08
SREBF1-215ENST00000487401 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
SREBF1-215ENST00000487401 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
SREBF1-215ENST00000487401 AKR1C3P42330 323 aa8.31□□□□□ -1.08
SREBF1-215ENST00000487401 ZNF674Q2M3X9 581 aa8.31□□□□□ -1.08
SREBF1-215ENST00000487401 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
SREBF1-215ENST00000487401 SMDT1Q9H4I9 107 aa8.31□□□□□ -1.08
SREBF1-215ENST00000487401 A0A087WWL8 130 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 M0R381 172 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 PAGE4O60829 102 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 LTAP01374 205 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 SMR3BP02814 79 aaPredicted RBP8.3□□□□□ -1.08
SREBF1-215ENST00000487401 LINC00694P0DN24 101 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 Q5VSD8 79 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 ZFP82Q8N141 532 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 Q8N3U1 123 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 SFT2D1Q8WV19 159 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 SFRP2Q96HF1 295 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 SMCO4Q9NRQ5 59 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 Q9UF83 564 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 URGCP-MRPS24S4R325 110 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 VPS13BQ7Z7G8 4022 aa8.3□□□□□ -1.08
SREBF1-215ENST00000487401 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
SREBF1-215ENST00000487401 S100A9P06702 114 aaKnown RBP8.29□□□□□ -1.08
SREBF1-215ENST00000487401 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
SREBF1-215ENST00000487401 CBLN2Q8IUK8 224 aa8.29□□□□□ -1.08
SREBF1-215ENST00000487401 FAM213BQ8TBF2 198 aa8.29□□□□□ -1.08
SREBF1-215ENST00000487401 TMEM70Q9BUB7 260 aa8.29□□□□□ -1.08
SREBF1-215ENST00000487401 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
SREBF1-215ENST00000487401 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
SREBF1-215ENST00000487401 A0A1B0GV50 99 aa8.28□□□□□ -1.08
SREBF1-215ENST00000487401 KCNIP4Q6PIL6 250 aa8.28□□□□□ -1.08
SREBF1-215ENST00000487401 RMI2Q96E14 147 aa8.28□□□□□ -1.08
SREBF1-215ENST00000487401 COX11Q9Y6N1 276 aa8.28□□□□□ -1.08
SREBF1-215ENST00000487401 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
SREBF1-215ENST00000487401 COLCA2A8K830 154 aa8.27□□□□□ -1.09
SREBF1-215ENST00000487401 HAMPP81172 84 aa8.27□□□□□ -1.09
SREBF1-215ENST00000487401 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SREBF1-215ENST00000487401 BAGE2Q86Y30 109 aa8.27□□□□□ -1.09
SREBF1-215ENST00000487401 C15orf54Q8N8G6 183 aa8.27□□□□□ -1.09
SREBF1-215ENST00000487401 MBD3L1Q8WWY6 194 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms