RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 WFDC2Q14508 124 aa16.32■□□□□ 0.2
LIME1-206ENST00000487026 LAGE3Q14657 143 aa16.32■□□□□ 0.2
LIME1-206ENST00000487026 HERC1Q15751 4861 aa16.32■□□□□ 0.2
LIME1-206ENST00000487026 ZNF674Q2M3X9 581 aa16.31■□□□□ 0.2
LIME1-206ENST00000487026 TM2D2Q9BX73 214 aa16.31■□□□□ 0.2
LIME1-206ENST00000487026 PHLDA3Q9Y5J5 127 aa16.31■□□□□ 0.2
LIME1-206ENST00000487026 M0R381 172 aa16.3■□□□□ 0.2
LIME1-206ENST00000487026 STOML3Q8TAV4 291 aa16.3■□□□□ 0.2
LIME1-206ENST00000487026 SFRP2Q96HF1 295 aa16.3■□□□□ 0.2
LIME1-206ENST00000487026 RHODO00212 210 aa16.29■□□□□ 0.2
LIME1-206ENST00000487026 LECT2O14960 151 aa16.29■□□□□ 0.2
LIME1-206ENST00000487026 LTAP01374 205 aa16.29■□□□□ 0.2
LIME1-206ENST00000487026 TPT1P13693 172 aaKnown RBP16.29■□□□□ 0.2
LIME1-206ENST00000487026 LINC01559Q495D7 138 aa16.29■□□□□ 0.2
LIME1-206ENST00000487026 FAM30AQ9NZY2 134 aa16.29■□□□□ 0.2
LIME1-206ENST00000487026 SRRM2Q9UQ35 2752 aaKnown RBP16.28■□□□□ 0.2
LIME1-206ENST00000487026 A0A087WWC5 75 aa16.28■□□□□ 0.2
LIME1-206ENST00000487026 TRBV6-1A0A0K0K1D8 114 aa16.28■□□□□ 0.2
LIME1-206ENST00000487026 A0A1B0GV50 99 aa16.28■□□□□ 0.2
LIME1-206ENST00000487026 PAGE4O60829 102 aa16.28■□□□□ 0.2
LIME1-206ENST00000487026 hCG_2014768A0A024R1R8 64 aa16.27■□□□□ 0.2
LIME1-206ENST00000487026 TRAV8-3A0A0A6YYJ7 113 aa16.27■□□□□ 0.2
LIME1-206ENST00000487026 AKR1C3P42330 323 aa16.27■□□□□ 0.2
LIME1-206ENST00000487026 TMEM70Q9BUB7 260 aa16.27■□□□□ 0.2
LIME1-206ENST00000487026 SFT2D1Q8WV19 159 aa16.26■□□□□ 0.19
LIME1-206ENST00000487026 DNAJC30Q96LL9 226 aa16.26■□□□□ 0.19
LIME1-206ENST00000487026 KCNRGQ8N5I3 272 aa16.25■□□□□ 0.19
LIME1-206ENST00000487026 FAM213BQ8TBF2 198 aa16.25■□□□□ 0.19
LIME1-206ENST00000487026 TCEAL7Q9BRU2 100 aa16.25■□□□□ 0.19
LIME1-206ENST00000487026 FAM229AH3BQW9 127 aa16.24■□□□□ 0.19
LIME1-206ENST00000487026 ZFP82Q8N141 532 aa16.24■□□□□ 0.19
LIME1-206ENST00000487026 BAALCQ8WXS3 180 aa16.24■□□□□ 0.19
LIME1-206ENST00000487026 RPL19P84098 196 aaKnown RBP16.23■□□□□ 0.19
LIME1-206ENST00000487026 TOR2AQ5JU69 321 aa16.23■□□□□ 0.19
LIME1-206ENST00000487026 AKAP14Q86UN6 197 aa16.23■□□□□ 0.19
LIME1-206ENST00000487026 NIT1Q86X76 327 aa16.23■□□□□ 0.19
LIME1-206ENST00000487026 MBD3L1Q8WWY6 194 aa16.23■□□□□ 0.19
LIME1-206ENST00000487026 MYCBP2O75592 4640 aa16.22■□□□□ 0.19
LIME1-206ENST00000487026 URGCP-MRPS24S4R325 110 aa16.22■□□□□ 0.19
LIME1-206ENST00000487026 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.21■□□□□ 0.19
LIME1-206ENST00000487026 SCO2A0A1W2PP80 73 aa16.21■□□□□ 0.19
LIME1-206ENST00000487026 SEC11BP0C7V7 166 aa16.21■□□□□ 0.19
LIME1-206ENST00000487026 KLK12Q9UKR0 248 aa16.21■□□□□ 0.19
LIME1-206ENST00000487026 DMBT1Q9UGM3 2413 aaPredicted RBP16.21■□□□□ 0.19
LIME1-206ENST00000487026 FLG2Q5D862 2391 aaPredicted RBP16.21■□□□□ 0.19
LIME1-206ENST00000487026 ZNF345Q14585 488 aa16.2■□□□□ 0.18
LIME1-206ENST00000487026 TCTE3Q8IZS6 198 aa16.2■□□□□ 0.18
LIME1-206ENST00000487026 ZNF471Q9BX82 626 aaPredicted RBP16.2■□□□□ 0.18
LIME1-206ENST00000487026 OR10AG1Q8NH19 301 aa16.19■□□□□ 0.18
LIME1-206ENST00000487026 IGKV2D-24A0A075B6R9 120 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 MUC21A0A0G2JKD1 596 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 MUC21A0A140T8X8 626 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 UMAD1C9J7I0 102 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 S100A9P06702 114 aaKnown RBP16.18■□□□□ 0.18
LIME1-206ENST00000487026 UBE2D3P61077 147 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 UBE2D2P62837 147 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 RPL36AP83881 106 aaKnown RBP16.18■□□□□ 0.18
LIME1-206ENST00000487026 LINC01620Q4KN68 170 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 BAGE2Q86Y30 109 aa16.18■□□□□ 0.18
LIME1-206ENST00000487026 RPL36ALQ969Q0 106 aaKnown RBP16.18■□□□□ 0.18
LIME1-206ENST00000487026 TRBV7-3A0A075B6L6 115 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 A0A087WX48 190 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 TRBV10-1A0A0K0K1A3 114 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 A0A1B0GVG6 124 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 HMSDA8MTL9 139 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 SSTP61278 116 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 UBE2WQ96B02 151 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 MLST8Q9BVC4 326 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 COX11Q9Y6N1 276 aa16.17■□□□□ 0.18
LIME1-206ENST00000487026 PFDN1O60925 122 aa16.16■□□□□ 0.18
LIME1-206ENST00000487026 C1QBP02746 253 aa16.16■□□□□ 0.18
LIME1-206ENST00000487026 PRR27Q6MZM9 219 aa16.16■□□□□ 0.18
LIME1-206ENST00000487026 RMI2Q96E14 147 aa16.16■□□□□ 0.18
LIME1-206ENST00000487026 A0A0D9SG52 128 aa16.15■□□□□ 0.18
LIME1-206ENST00000487026 KANTRA0A1W2PQU2 76 aa16.15■□□□□ 0.18
LIME1-206ENST00000487026 BCL2L11O43521 198 aa16.15■□□□□ 0.18
LIME1-206ENST00000487026 H2AFB1P0C5Y9 115 aa16.15■□□□□ 0.18
LIME1-206ENST00000487026 ZNF56Q15929 161 aa16.15■□□□□ 0.18
LIME1-206ENST00000487026 RAB4BP61018 213 aa16.14■□□□□ 0.17
LIME1-206ENST00000487026 TMUB2Q71RG4 321 aa16.14■□□□□ 0.17
LIME1-206ENST00000487026 NEXN-AS1Q8NBZ9 246 aa16.14■□□□□ 0.17
LIME1-206ENST00000487026 OR10G8Q8NGN5 311 aa16.14■□□□□ 0.17
LIME1-206ENST00000487026 TMEM262E9PQX1 116 aa16.13■□□□□ 0.17
LIME1-206ENST00000487026 KCNIP4Q6PIL6 250 aa16.13■□□□□ 0.17
LIME1-206ENST00000487026 RBFOX3A6NFN3 312 aa16.12■□□□□ 0.17
LIME1-206ENST00000487026 CCL20P78556 96 aa16.12■□□□□ 0.17
LIME1-206ENST00000487026 Q6ZSA8 131 aa16.12■□□□□ 0.17
LIME1-206ENST00000487026 SSBP4Q9BWG4 385 aaPredicted RBP16.12■□□□□ 0.17
LIME1-206ENST00000487026 TRBV6-8A0A0A6YYG3 113 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 SNAI2O43623 268 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 CXCL1P09341 107 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 ELOBQ15370 118 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 SPANXN1Q5VSR9 72 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 Q8N976 141 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 CHCHD7Q9BUK0 85 aa16.11■□□□□ 0.17
LIME1-206ENST00000487026 F5H697 171 aa16.1■□□□□ 0.17
LIME1-206ENST00000487026 RPL35P42766 123 aaKnown RBP16.1■□□□□ 0.17
LIME1-206ENST00000487026 DERL1Q9BUN8 251 aa16.1■□□□□ 0.17
LIME1-206ENST00000487026 OR5AL1P0C617 328 aa16.09■□□□□ 0.17
LIME1-206ENST00000487026 ENHOQ6UWT2 76 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms