RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 PLNP26678 52 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 G0S2P27469 103 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 TFPI2P48307 235 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 SUMO2P61956 95 aaKnown RBP5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 SEC11AP67812 179 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 MPV17L2Q567V2 206 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 FAM159AQ6UWV7 190 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 FOXI2Q6ZQN5 318 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 Q6ZQT7 251 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 RASL10AQ92737 203 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 MCRIP2Q9BUT9 160 aaKnown RBP5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 KIF25-AS1Q9Y6Z4 181 aa5.25□□□□□ -1.57
SMARCAL1-212ENST00000486983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 HOXA3O43365 443 aaPredicted RBP5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 HOXD3P31249 432 aaPredicted RBP5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 CDKN1BP46527 198 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 HSD52Q0P140 79 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 TOMM6Q96B49 74 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 C9orf85Q96MD7 179 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 HIGD1BQ9P298 99 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 HHLA3Q9XRX5 114 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 LRRK2Q5S007 2527 aa5.24□□□□□ -1.57
SMARCAL1-212ENST00000486983 AKAP6Q13023 2319 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 A0A087WX48 190 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 J3KRW8 73 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 PRSS1P07477 247 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 SYNJ2BPP57105 145 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 FXYD7P58549 80 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 LINC00315P59091 139 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 DEFB1P60022 68 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 TMEM97Q5BJF2 176 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 C10orf99Q6UWK7 81 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 C14orf178Q8N769 122 aaPredicted RBP5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 C4orf3Q8WVX3 66 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 C18orf15Q96N68 181 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 FOXC2Q99958 501 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 EDA2RQ9HAV5 297 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 DKK2Q9UBU2 259 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 CRYBG3Q68DQ2 2970 aa5.23□□□□□ -1.57
SMARCAL1-212ENST00000486983 CENPEQ02224 2701 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 IGKV3-7A0A075B6H7 116 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 TRGV11A0A075B6L2 103 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 IGHV3-16A0A0C4DH30 117 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 F8VRH5 84 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 LINC01619G3V211 115 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 TAX1BP3O14907 124 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 GNRH2O43555 120 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 NPSP0C0P6 89 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 ZNF688P0C7X2 276 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 EDN2P20800 178 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 UBE2V1Q13404 147 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 PIK3CD-AS1Q5SR53 167 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 AMTNQ6UX39 209 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 MAPK1IP1LQ8NDC0 245 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 Q96MF0 132 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 PEMTQ9UBM1 199 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 TP73-AS1Q9UF72 201 aa5.22□□□□□ -1.57
SMARCAL1-212ENST00000486983 MED13LQ71F56 2210 aa5.21□□□□□ -1.57
SMARCAL1-212ENST00000486983 SPTAN1Q13813 2472 aaKnown RBP5.21□□□□□ -1.57
SMARCAL1-212ENST00000486983 PRRC2AP48634 2157 aaKnown RBP5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 IGHV1OR15-1A0A075B7D0 117 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 TRAV12-3A0A0B4J271 114 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 A6NDN8 102 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 H7C1H1 209 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 MGPP08493 103 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 CD7P09564 240 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 SRD5A1P18405 259 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 TCTEX1D4Q5JR98 221 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 ADAMTSL5Q6ZMM2 481 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 ERASQ7Z444 233 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 NEXN-AS1Q8NBZ9 246 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 PTH2Q96A98 100 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 LINC00467Q9BRT7 94 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 MRPL35Q9NZE8 188 aaKnown RBP5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZNF256Q9Y2P7 627 aaPredicted RBP5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 ITPR2Q14571 2701 aa5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 ANKRD17O75179 2603 aaKnown RBP5.21□□□□□ -1.58
SMARCAL1-212ENST00000486983 TRBV27A0A0K0K1C4 114 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 CBY3A6NI87 242 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 VCYO14598 125 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 NMUP48645 174 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 POLR2KP53803 58 aaKnown RBP5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 RIPPLY3P57055 190 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 TAL2Q16559 108 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 PAPPA-AS1Q5QFB9 102 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZC2HC1BQ5TFG8 222 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 C2orf66Q6UXQ4 117 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 RPL39LQ96EH5 51 aaKnown RBP5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 TMEM141Q96I45 108 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 SCGB3A1Q96QR1 104 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 TIMM17AQ99595 171 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 KIR2DL4Q99706 377 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 CSTL1Q9H114 145 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 CYSLTR1Q9Y271 337 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 UNC79Q9P2D8 2635 aa5.2□□□□□ -1.58
SMARCAL1-212ENST00000486983 CREBBPQ92793 2442 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms