RNA–Protein interactions for RNA: ENST00000486621.1

TTC4-204, Transcript of tetratricopeptide repeat domain 4, human

TSL 2

Gene TTC4, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC4-204	ENST00000486621	PARL	Q9H300	379 aa		2.61	□□□□□ -1.99
TTC4-204	ENST00000486621	NPVF	Q9HCQ7	196 aa		2.61	□□□□□ -1.99
TTC4-204	ENST00000486621	KCNIP3	Q9Y2W7	256 aa		2.61	□□□□□ -1.99
TTC4-204	ENST00000486621	LENEP	Q9Y5L5	61 aa		2.61	□□□□□ -1.99
TTC4-204	ENST00000486621	TRBV7-3	A0A075B6L6	115 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	RBAKDN	A6NC62	111 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	ATP5H	O75947	161 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	NDUFB4	O95168	129 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	PTTG1	O95997	202 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	TBP	P20226	339 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	RBX1	P62877	108 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	CTAG1A	P78358	180 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	LGALSL	Q3ZCW2	172 aa	Predicted RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621		Q6ZRG5	221 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	PHF5A	Q7RTV0	110 aa	Known RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	C12orf45	Q8N5I9	185 aa	Predicted RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	NEXN-AS1	Q8NBZ9	246 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	NAA60	Q9H7X0	242 aa		2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	GPN1	Q9HCN4	374 aa	Predicted RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	C14orf166	Q9Y224	244 aa	Known RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	TMA7	Q9Y2S6	64 aa	Known RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	STRAP	Q9Y3F4	350 aa	Known RBP	2.6	□□□□□ -1.99
TTC4-204	ENST00000486621	IGLV5-37	A0A075B6J1	123 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621		A0A0B4J2A0	478 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	TRBV10-1	A0A0K0K1A3	114 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621		A0A1B0GVG6	124 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621		K7EPK0	472 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	TSHB	P01222	138 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	GNAO1	P09471	354 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	CSN1S1	P47710	185 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	CAV2	P51636	162 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	S100A10	P60903	97 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	UBE2D3	P61077	147 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	UBE2D2	P62837	147 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	SLC38A11	Q08AI6	406 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	GAGE2B	Q13066	116 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	SS18	Q15532	418 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	SCGB2B2	Q4G0G5	96 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	C9orf116	Q5BN46	136 aa	Predicted RBP	2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	RNASE10	Q5GAN6	216 aa	Known RBP	2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	EIF5AL1	Q6IS14	154 aa	Known RBP	2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	IZUMO2	Q6UXV1	221 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	C15orf56	Q8N910	161 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	TSKU	Q8WUA8	353 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	TXNL4B	Q9NX01	149 aa	Known RBP	2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	NDUFB11	Q9NX14	153 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	COMMD3	Q9UBI1	195 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	SHPK	Q9UHJ6	478 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	RABL2B	Q9UNT1	228 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621	TPRKB	Q9Y3C4	175 aa		2.59	□□□□□ -1.99
TTC4-204	ENST00000486621		A0A087X002	238 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	LOC100506127	A0A0U1RQW1	187 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	SMIM31	A0A1B0GVY4	71 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	FNDC10	F2Z333	226 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	SYNGR2	O43760	224 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	FGF6	P10767	208 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	SDC2	P34741	201 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	RRAS2	P62070	204 aa	Predicted RBP	2.58	□□□□□ -2
TTC4-204	ENST00000486621	MXD1	Q05195	221 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	GAGE6	Q13070	117 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	TMEM97	Q5BJF2	176 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	UFSP1	Q6NVU6	142 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	LYZL2	Q7Z4W2	148 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	OR1L4	Q8NGR5	311 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	SOST	Q9BQB4	213 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	RTBDN	Q9BSG5	229 aa	Predicted RBP	2.58	□□□□□ -2
TTC4-204	ENST00000486621	TMEM14C	Q9P0S9	112 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	PHLDA3	Q9Y5J5	127 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	USH2A	O75445	5202 aa		2.58	□□□□□ -2
TTC4-204	ENST00000486621	GVQW2	A0A096LPI5	108 aa	Predicted RBP	2.57	□□□□□ -2
TTC4-204	ENST00000486621	PIGBOS1	A0A0B4J2F0	54 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	LOC107984640	A0A0U1RRK4	108 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	CD3D	P04234	171 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	UBE2NL	Q5JXB2	153 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	FAM74A4	Q5TZK3	123 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	FP248	Q71RG6	208 aa	Predicted RBP	2.57	□□□□□ -2
TTC4-204	ENST00000486621	LINC00304	Q8N9R0	145 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	DYNC2LI1	Q8TCX1	351 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	CARD19	Q96LW7	228 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	PFDN5	Q99471	154 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	JPT2	Q9H910	190 aa		2.57	□□□□□ -2
TTC4-204	ENST00000486621	TRBV25-1	A0A075B6N4	114 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621		H3BP45	60 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	NBEAP1	P0C6P0	100 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	PYY	P10082	97 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	SLC25A6	P12236	298 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	RNASE3	P12724	160 aa	Known RBP	2.56	□□□□□ -2
TTC4-204	ENST00000486621	S100A4	P26447	101 aa	Known RBP	2.56	□□□□□ -2
TTC4-204	ENST00000486621	SULT1A2	P50226	295 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	SYCN	Q0VAF6	134 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	C20orf203	Q8NBC4	194 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	DIRAS2	Q96HU8	199 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	WFDC1	Q9HC57	220 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	TREM1	Q9NP99	234 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	PSENEN	Q9NZ42	101 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621	CCDC59	Q9P031	241 aa	Known RBP	2.56	□□□□□ -2
TTC4-204	ENST00000486621	GPR132	Q9UNW8	380 aa		2.56	□□□□□ -2
TTC4-204	ENST00000486621		F6UZH7	168 aa		2.55	□□□□□ -2
TTC4-204	ENST00000486621	ZNF861P	O60384	105 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms