RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
CHMP3-208ENST00000486404 JPT2Q9H910 190 aa8.76□□□□□ -1.01
CHMP3-208ENST00000486404 HERC2O95714 4834 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 A0A087WWL8 130 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 CCL20P78556 96 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 RPL19P84098 196 aaKnown RBP8.75□□□□□ -1.01
CHMP3-208ENST00000486404 MEF2BQ02080 365 aaPredicted RBP8.75□□□□□ -1.01
CHMP3-208ENST00000486404 CENPWQ5EE01 88 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
CHMP3-208ENST00000486404 C11orf52Q96A22 123 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 SFRP2Q96HF1 295 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 SAMD10Q9BYL1 202 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 SCRT2Q9NQ03 307 aa8.75□□□□□ -1.01
CHMP3-208ENST00000486404 PDE6DO43924 150 aa8.74□□□□□ -1.01
CHMP3-208ENST00000486404 CXCL1P09341 107 aa8.74□□□□□ -1.01
CHMP3-208ENST00000486404 BCL2P10415 239 aa8.74□□□□□ -1.01
CHMP3-208ENST00000486404 LINC01556Q5JQF7 62 aa8.74□□□□□ -1.01
CHMP3-208ENST00000486404 Q6ZSN1 163 aa8.74□□□□□ -1.01
CHMP3-208ENST00000486404 C14orf178Q8N769 122 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-208ENST00000486404 DERL1Q9BUN8 251 aa8.74□□□□□ -1.01
CHMP3-208ENST00000486404 PSCAO43653 123 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 IGHV3-30P01768 117 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 IGHV3-33P01772 117 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 IGHV3-30-3P0DP02 117 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 IGHV3-30-5P0DP03 117 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 GNG4P50150 75 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 ZNF56Q15929 161 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 SPANXN1Q5VSR9 72 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 UFSP1Q6NVU6 142 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 C9orf62Q8N4C0 152 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 OR10AG1Q8NH19 301 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
CHMP3-208ENST00000486404 MLST8Q9BVC4 326 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 DNAH11Q96DT5 4516 aa8.73□□□□□ -1.01
CHMP3-208ENST00000486404 A0A087WWC5 75 aa8.72□□□□□ -1.01
CHMP3-208ENST00000486404 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
CHMP3-208ENST00000486404 TAGLN2P37802 199 aaKnown RBP8.72□□□□□ -1.01
CHMP3-208ENST00000486404 Q9HAA7 133 aa8.72□□□□□ -1.01
CHMP3-208ENST00000486404 OR5AL1P0C617 328 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 SMIM17P0DL12 118 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 KRTAP10-2P60368 255 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 RPL36AP83881 106 aaKnown RBP8.71□□□□□ -1.02
CHMP3-208ENST00000486404 RPL36ALQ969Q0 106 aaKnown RBP8.71□□□□□ -1.02
CHMP3-208ENST00000486404 SMIM12Q96EX1 92 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 AP1S3Q96PC3 154 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 TPPP3Q9BW30 176 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 MED9Q9NWA0 146 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 VAX2Q9UIW0 290 aa8.71□□□□□ -1.02
CHMP3-208ENST00000486404 MUC21A0A0G2JKD1 596 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 MUC21A0A140T8X8 626 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 SNAI2O43623 268 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 RPS20P60866 119 aaKnown RBP8.7□□□□□ -1.02
CHMP3-208ENST00000486404 OR2D3Q8NGH3 330 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 BIN3Q9NQY0 253 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 URGCP-MRPS24S4R325 110 aa8.7□□□□□ -1.02
CHMP3-208ENST00000486404 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
CHMP3-208ENST00000486404 A0A087WTM6 91 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 XKRY2A2RUG3 117 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 IBA57-AS1B1ANH7 110 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 F5H697 171 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 P01737 135 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 SSTP61278 116 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 LAGE3Q14657 143 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 KCNIP4Q6PIL6 250 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 ALKAL2Q6UX46 152 aa8.69□□□□□ -1.02
CHMP3-208ENST00000486404 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.69□□□□□ -1.02
CHMP3-208ENST00000486404 RAB4BP61018 213 aa8.68□□□□□ -1.02
CHMP3-208ENST00000486404 TOR2AQ5JU69 321 aa8.68□□□□□ -1.02
CHMP3-208ENST00000486404 FER1L6-AS1Q8NA97 138 aa8.68□□□□□ -1.02
CHMP3-208ENST00000486404 Q9UF83 564 aa8.68□□□□□ -1.02
CHMP3-208ENST00000486404 MGPP08493 103 aa8.67□□□□□ -1.02
CHMP3-208ENST00000486404 GZMBP10144 247 aa8.67□□□□□ -1.02
CHMP3-208ENST00000486404 BLOC1S1P78537 153 aa8.67□□□□□ -1.02
CHMP3-208ENST00000486404 SSBP4Q9BWG4 385 aaPredicted RBP8.67□□□□□ -1.02
CHMP3-208ENST00000486404 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 IGLV2-8P01709 118 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 UBE2D3P61077 147 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 UBE2D2P62837 147 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 CACNG7P62955 275 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 Q8N3U1 123 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 TM2D2Q9BX73 214 aa8.66□□□□□ -1.02
CHMP3-208ENST00000486404 TRBV20OR9-2A0A075B6H5 130 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 A0A087WX48 190 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 TRAV8-3A0A0A6YYJ7 113 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 C19orf71A6NCJ1 209 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 RBFOX3A6NFN3 312 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 FUSP35637 526 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHMP3-208ENST00000486404 MAPKAPK5-AS1Q8N8E1 139 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 OR10G8Q8NGN5 311 aa8.65□□□□□ -1.02
CHMP3-208ENST00000486404 IGLC6P0CF74 106 aa8.64□□□□□ -1.03
CHMP3-208ENST00000486404 NKX2-5P52952 324 aaPredicted RBP8.64□□□□□ -1.03
CHMP3-208ENST00000486404 CEBPGP53567 150 aa8.64□□□□□ -1.03
CHMP3-208ENST00000486404 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
CHMP3-208ENST00000486404 NEXN-AS1Q8NBZ9 246 aa8.64□□□□□ -1.03
CHMP3-208ENST00000486404 RMI2Q96E14 147 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms