RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 NUP35Q8NFH5 326 aa6.87□□□□□ -1.31
SND1-213ENST00000486037 ZNRF2Q8NHG8 242 aa6.87□□□□□ -1.31
SND1-213ENST00000486037 TRAV9-1A0A075B6T8 112 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 HIGD1CA8MV81 97 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 SPINK4O60575 86 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 RPS20P60866 119 aaKnown RBP6.86□□□□□ -1.31
SND1-213ENST00000486037 FAM210BQ96KR6 192 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 PGLYRP4Q96LB8 373 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 GFRA4Q9GZZ7 299 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 NAGKQ9UJ70 344 aa6.86□□□□□ -1.31
SND1-213ENST00000486037 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
SND1-213ENST00000486037 TYMSP04818 313 aa6.85□□□□□ -1.31
SND1-213ENST00000486037 HTN3P15516 51 aa6.85□□□□□ -1.31
SND1-213ENST00000486037 RAB5AP20339 215 aa6.85□□□□□ -1.31
SND1-213ENST00000486037 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
SND1-213ENST00000486037 HAMPP81172 84 aa6.85□□□□□ -1.31
SND1-213ENST00000486037 BTF3L4Q96K17 158 aa6.85□□□□□ -1.31
SND1-213ENST00000486037 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.31
SND1-213ENST00000486037 XKRY2A2RUG3 117 aa6.84□□□□□ -1.31
SND1-213ENST00000486037 GNRH2O43555 120 aa6.84□□□□□ -1.31
SND1-213ENST00000486037 EMP1P54849 157 aa6.84□□□□□ -1.31
SND1-213ENST00000486037 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.31
SND1-213ENST00000486037 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
SND1-213ENST00000486037 XCL2Q9UBD3 114 aa6.84□□□□□ -1.31
SND1-213ENST00000486037 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 A0A1B0GXF2 115 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 INSP01308 110 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 CTRLP40313 264 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 TDRG1Q3Y452 100 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 ANKRD39Q53RE8 183 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 DNLZQ5SXM8 178 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 FAM159AQ6UWV7 190 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 C1orf158Q8N1D5 194 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 FER1L6-AS1Q8NA97 138 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 TPPP3Q9BW30 176 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 TP53TG3Q9ULZ0 132 aa6.83□□□□□ -1.32
SND1-213ENST00000486037 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
SND1-213ENST00000486037 H3BVH4 76 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 SNAI2O43623 268 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 PRM2P04554 102 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 RNASE3P12724 160 aaKnown RBP6.82□□□□□ -1.32
SND1-213ENST00000486037 RPS10P46783 165 aaKnown RBP6.82□□□□□ -1.32
SND1-213ENST00000486037 KRTAP10-1P60331 282 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 KCNS1Q96KK3 526 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
SND1-213ENST00000486037 SSBP4Q9BWG4 385 aaPredicted RBP6.82□□□□□ -1.32
SND1-213ENST00000486037 IGHV3-16A0A0C4DH30 117 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 A0A1B0GUT8 65 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 ASIPP42127 132 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 NUTF2P61970 127 aaKnown RBP6.81□□□□□ -1.32
SND1-213ENST00000486037 TMEM136Q6ZRR5 245 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 OR10AG1Q8NH19 301 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 LINC00467Q9BRT7 94 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 DKK2Q9UBU2 259 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 LINC00588Q9Y4M8 146 aa6.81□□□□□ -1.32
SND1-213ENST00000486037 TIMM8BQ9Y5J9 83 aaPredicted RBP6.81□□□□□ -1.32
SND1-213ENST00000486037 F2Z2F3 143 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 PHOX2AO14813 284 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 OR5AL1P0C617 328 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 BTF3P20290 206 aaKnown RBP6.8□□□□□ -1.32
SND1-213ENST00000486037 S100A4P26447 101 aaKnown RBP6.8□□□□□ -1.32
SND1-213ENST00000486037 CAMPP49913 170 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 SSTP61278 116 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 RIGQ13278 110 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 Q6ZSN1 163 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 GATD1Q8NB37 220 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 SYT8Q8NBV8 401 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 BORCS7Q96B45 105 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 LINC01587Q99440 93 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 CNFNQ9BYD5 112 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 MSRB1Q9NZV6 116 aa6.8□□□□□ -1.32
SND1-213ENST00000486037 TRGV11A0A075B6L2 103 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 IGHV3OR16-12A0A075B7B8 117 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 CBY3A6NI87 242 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 SNURFLB1AK76 121 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 TRGC2P03986 189 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 HTN1P15515 57 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 AZU1P20160 251 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 NTF3P20783 257 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 HBBP68871 147 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 FABP9Q0Z7S8 132 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 WDR73Q6P4I2 378 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 TMEM256Q8N2U0 113 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 C9orf85Q96MD7 179 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 GNB1LQ9BYB4 327 aa6.79□□□□□ -1.32
SND1-213ENST00000486037 MRPL18Q9H0U6 180 aaKnown RBP6.79□□□□□ -1.32
SND1-213ENST00000486037 TRAPPC1Q9Y5R8 145 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms