RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ASIPP42127 132 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 RHOHQ15669 191 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 FAM162BQ5T6X4 162 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 CST9LP1Q5W188 147 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 C10orf126Q8N4M7 172 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 ZC2HC1AQ96GY0 325 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
VPS50-218ENST00000485994 CDK2AP2O75956 126 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 ARMS2P0C7Q2 107 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 EVI2AP22794 236 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 SULT1A2P50226 295 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 CCL20P78556 96 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 LINC01556Q5JQF7 62 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 LELP1Q5T871 98 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 SYT8Q8NBV8 401 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 FAM213BQ8TBF2 198 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 SFRP2Q96HF1 295 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 GTSF1LQ9H1H1 148 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 PARLQ9H300 379 aa4.75□□□□□ -1.65
VPS50-218ENST00000485994 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 RHODO00212 210 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 SH2D1AO60880 128 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 CRYGDP07320 174 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 LINC00694P0DN24 101 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 AKR1C3P42330 323 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 LINC00315P59091 139 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 BAGE2Q86Y30 109 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 ATP6V0E2Q8NHE4 81 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 C11orf52Q96A22 123 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 SMIM12Q96EX1 92 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 MANBALQ9NQG1 85 aa4.74□□□□□ -1.65
VPS50-218ENST00000485994 A0A087WWC5 75 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 TRAV8-6A0A0B4J262 113 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 TRBV10-1A0A0K0K1A3 114 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 LOC100131303A0A0U1RQF7 123 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 IBA57-AS1B1ANH7 110 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 SNAI2O43623 268 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 OR5AL1P0C617 328 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
VPS50-218ENST00000485994 ALKAL2Q6UX46 152 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 Q6ZSN1 163 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 WFDC10BQ8IUB3 73 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 NHLRC2Q8NBF2 726 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 LYPD6BQ8NI32 183 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 JPT2Q9H910 190 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 MSRB1Q9NZV6 116 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 PHLDA3Q9Y5J5 127 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 HSPG2P98160 4391 aa4.73□□□□□ -1.65
VPS50-218ENST00000485994 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 C16orf90A8MZG2 172 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 PDE6DO43924 150 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 SPATA12Q7Z6I5 190 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 ZFP82Q8N141 532 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 OR10G8Q8NGN5 311 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 SAMD10Q9BYL1 202 aa4.72□□□□□ -1.65
VPS50-218ENST00000485994 APOBP04114 4563 aaKnown RBP4.71□□□□□ -1.66
VPS50-218ENST00000485994 IGHV3-73A0A0B4J1V6 119 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 A0A1B0GV50 99 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 H3BVH4 76 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 M0R036 132 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 EIF4EBP3O60516 100 aaPredicted RBP4.71□□□□□ -1.66
VPS50-218ENST00000485994 NDUFS6O75380 124 aaKnown RBP4.71□□□□□ -1.66
VPS50-218ENST00000485994 IGLV2-8P01709 118 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 RPL35P42766 123 aaKnown RBP4.71□□□□□ -1.66
VPS50-218ENST00000485994 ERVFC1-1P60608 527 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 RAB4BP61018 213 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 LAGE3Q14657 143 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 PRR27Q6MZM9 219 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 WDR73Q6P4I2 378 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 TEX261Q6UWH6 196 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 BIN3Q9NQY0 253 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
VPS50-218ENST00000485994 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 TRBV7-3A0A075B6L6 115 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 A0A087WTM6 91 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 C19orf71A6NCJ1 209 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 IFNA1P01562 189 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 RPS20P60866 119 aaKnown RBP4.7□□□□□ -1.66
VPS50-218ENST00000485994 BLOC1S1P78537 153 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 IFITM2Q01629 132 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 MEF2BQ02080 365 aaPredicted RBP4.7□□□□□ -1.66
VPS50-218ENST00000485994 OR10J3Q5JRS4 329 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 C14orf178Q8N769 122 aaPredicted RBP4.7□□□□□ -1.66
VPS50-218ENST00000485994 CHCHD7Q9BUK0 85 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 GNG13Q9P2W3 67 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 Q9UF83 564 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 VAX2Q9UIW0 290 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 KIF25-AS1Q9Y6Z4 181 aa4.7□□□□□ -1.66
VPS50-218ENST00000485994 TRAV8-3A0A0A6YYJ7 113 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 LRCOL1A6NCL2 159 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 GAGE12JA6NER3 117 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 F2Z2F3 143 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 M0R381 172 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
VPS50-218ENST00000485994 GAGE1Q13065 139 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 GAGE4Q13068 117 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 GAGE5Q13069 117 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 GAGE13Q4V321 117 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 TOR2AQ5JU69 321 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms