RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ATP6V0E2Q8NHE4 81 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 MED9Q9NWA0 146 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 CXCL1P09341 107 aa12.5□□□□□ -0.41
COL1A1-206ENST00000485870 NKX2-5P52952 324 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-206ENST00000485870 OR10J3Q5JRS4 329 aa12.5□□□□□ -0.41
COL1A1-206ENST00000485870 OR10AG1Q8NH19 301 aa12.5□□□□□ -0.41
COL1A1-206ENST00000485870 Q9UF83 564 aa12.5□□□□□ -0.41
COL1A1-206ENST00000485870 VAX2Q9UIW0 290 aa12.5□□□□□ -0.41
COL1A1-206ENST00000485870 TRAV8-6A0A0B4J262 113 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 CRYGDP07320 174 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 GNG4P50150 75 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 Q6ZRN7 208 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-206ENST00000485870 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
COL1A1-206ENST00000485870 IGHV3-38A0A0C4DH36 116 aa12.48□□□□□ -0.41
COL1A1-206ENST00000485870 LINC00694P0DN24 101 aa12.48□□□□□ -0.41
COL1A1-206ENST00000485870 LELP1Q5T871 98 aa12.48□□□□□ -0.41
COL1A1-206ENST00000485870 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
COL1A1-206ENST00000485870 C16orf90A8MZG2 172 aa12.47□□□□□ -0.41
COL1A1-206ENST00000485870 SSTP61278 116 aa12.47□□□□□ -0.41
COL1A1-206ENST00000485870 SPATA12Q7Z6I5 190 aa12.47□□□□□ -0.41
COL1A1-206ENST00000485870 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
COL1A1-206ENST00000485870 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 K7EP13 123 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 SNAI2O43623 268 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.41
COL1A1-206ENST00000485870 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 NFE4Q86UQ8 179 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 C10orf126Q8N4M7 172 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
COL1A1-206ENST00000485870 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 GZMBP10144 247 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 BLOC1S1P78537 153 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 OR2D3Q8NGH3 330 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 SSBP4Q9BWG4 385 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-206ENST00000485870 RYR1P21817 5038 aa12.45□□□□□ -0.42
COL1A1-206ENST00000485870 C19orf71A6NCJ1 209 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 IGHV3-33P01772 117 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 IGHV3-30-3P0DP02 117 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 ZNF56Q15929 161 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
COL1A1-206ENST00000485870 KRTAP10-2P60368 255 aa12.43□□□□□ -0.42
COL1A1-206ENST00000485870 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
COL1A1-206ENST00000485870 P01737 135 aa12.42□□□□□ -0.42
COL1A1-206ENST00000485870 RPS20P60866 119 aaKnown RBP12.42□□□□□ -0.42
COL1A1-206ENST00000485870 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
COL1A1-206ENST00000485870 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
COL1A1-206ENST00000485870 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
COL1A1-206ENST00000485870 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
COL1A1-206ENST00000485870 ERVFC1-1P60608 527 aa12.41□□□□□ -0.42
COL1A1-206ENST00000485870 RAB4BP61018 213 aa12.41□□□□□ -0.42
COL1A1-206ENST00000485870 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
COL1A1-206ENST00000485870 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
COL1A1-206ENST00000485870 IGLC6P0CF74 106 aa12.4□□□□□ -0.42
COL1A1-206ENST00000485870 Q8N3U1 123 aa12.4□□□□□ -0.42
COL1A1-206ENST00000485870 LYPD6BQ8NI32 183 aa12.4□□□□□ -0.42
COL1A1-206ENST00000485870 AP1S3Q96PC3 154 aa12.4□□□□□ -0.42
COL1A1-206ENST00000485870 Q9HAA7 133 aa12.4□□□□□ -0.42
COL1A1-206ENST00000485870 A0A087WWC5 75 aa12.39□□□□□ -0.43
COL1A1-206ENST00000485870 XKRY2A2RUG3 117 aa12.39□□□□□ -0.43
COL1A1-206ENST00000485870 IBA57-AS1B1ANH7 110 aa12.39□□□□□ -0.43
COL1A1-206ENST00000485870 F5H697 171 aa12.39□□□□□ -0.43
COL1A1-206ENST00000485870 EREGO14944 169 aa12.39□□□□□ -0.43
COL1A1-206ENST00000485870 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 K7EN84 100 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 UBE2D3P61077 147 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 UBE2D2P62837 147 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
COL1A1-206ENST00000485870 A0A087WTM6 91 aa12.37□□□□□ -0.43
COL1A1-206ENST00000485870 TMEM250H0YL14 139 aa12.37□□□□□ -0.43
COL1A1-206ENST00000485870 FUSP35637 526 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL1A1-206ENST00000485870 CEBPGP53567 150 aa12.37□□□□□ -0.43
COL1A1-206ENST00000485870 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
COL1A1-206ENST00000485870 OCC1Q8TAD7 63 aa12.37□□□□□ -0.43
COL1A1-206ENST00000485870 RNASE7Q9H1E1 156 aaKnown RBP12.37□□□□□ -0.43
COL1A1-206ENST00000485870 KIF25-AS1Q9Y6Z4 181 aa12.37□□□□□ -0.43
COL1A1-206ENST00000485870 PSCAO43653 123 aa12.36□□□□□ -0.43
COL1A1-206ENST00000485870 MGPP08493 103 aa12.36□□□□□ -0.43
COL1A1-206ENST00000485870 CACNG7P62955 275 aa12.36□□□□□ -0.43
COL1A1-206ENST00000485870 LYZL1Q6UWQ5 148 aa12.36□□□□□ -0.43
COL1A1-206ENST00000485870 OR10G8Q8NGN5 311 aa12.36□□□□□ -0.43
COL1A1-206ENST00000485870 DAZ4Q86SG3 579 aaKnown RBP12.35□□□□□ -0.43
COL1A1-206ENST00000485870 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
COL1A1-206ENST00000485870 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
COL1A1-206ENST00000485870 DAZ3Q9NR90 486 aaKnown RBP12.35□□□□□ -0.43
COL1A1-206ENST00000485870 F2Z2F3 143 aa12.34□□□□□ -0.43
COL1A1-206ENST00000485870 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
COL1A1-206ENST00000485870 LAGE3Q14657 143 aa12.33□□□□□ -0.44
COL1A1-206ENST00000485870 NIT1Q86X76 327 aa12.33□□□□□ -0.44
COL1A1-206ENST00000485870 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms