RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 F2Z2F3 143 aa10.79□□□□□ -0.68
RPUSD3-217ENST00000485705 F8W036 122 aa10.79□□□□□ -0.68
RPUSD3-217ENST00000485705 CACNG7P62955 275 aa10.79□□□□□ -0.68
RPUSD3-217ENST00000485705 FAM74A4Q5TZK3 123 aa10.79□□□□□ -0.68
RPUSD3-217ENST00000485705 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
RPUSD3-217ENST00000485705 PGLYRP4Q96LB8 373 aa10.79□□□□□ -0.68
RPUSD3-217ENST00000485705 LOC100131303A0A0U1RQF7 123 aa10.78□□□□□ -0.68
RPUSD3-217ENST00000485705 NTF3P20783 257 aa10.78□□□□□ -0.68
RPUSD3-217ENST00000485705 SLAQ13239 276 aa10.78□□□□□ -0.68
RPUSD3-217ENST00000485705 ZFP2Q6ZN57 461 aa10.78□□□□□ -0.68
RPUSD3-217ENST00000485705 C14orf178Q8N769 122 aaPredicted RBP10.78□□□□□ -0.68
RPUSD3-217ENST00000485705 C15orf53Q8NAA6 179 aa10.78□□□□□ -0.68
RPUSD3-217ENST00000485705 A0A096LPF7 62 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 HIGD1CA8MV81 97 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 H3BNG1 76 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 CIDEAO60543 219 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 PNRC1Q12796 327 aaPredicted RBP10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 RNF212Q495C1 297 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 SLC25A29Q8N8R3 303 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 SEC11CQ9BY50 192 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
RPUSD3-217ENST00000485705 KMT2AQ03164 3969 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 RHODO00212 210 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 GYPEP15421 78 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 S100A1P23297 94 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 WDR73Q6P4I2 378 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 LINC00476Q8WZB0 136 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 Q9UF83 564 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 KIF25-AS1Q9Y6Z4 181 aa10.76□□□□□ -0.69
RPUSD3-217ENST00000485705 TRBV6-4A0A1B0GX49 114 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 FAM231BA6NCW3 169 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 EVI2AP22794 236 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 LINC00315P59091 139 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 TWIST1Q15672 202 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 AP1S3Q96PC3 154 aa10.75□□□□□ -0.69
RPUSD3-217ENST00000485705 LCE6AA0A183 80 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 SMIM27A0A1W2PRY6 76 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 K7EQD1 137 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 LY6G6CO95867 125 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 P0DMU3 169 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 FAM231AP0DMU4 169 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 FAM231CP0DMU5 169 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
RPUSD3-217ENST00000485705 BIRC6Q9NR09 4857 aa10.73□□□□□ -0.69
RPUSD3-217ENST00000485705 HYDINQ4G0P3 5121 aa10.73□□□□□ -0.69
RPUSD3-217ENST00000485705 RHOHQ15669 191 aa10.73□□□□□ -0.69
RPUSD3-217ENST00000485705 LGALS9CQ6DKI2 356 aa10.73□□□□□ -0.69
RPUSD3-217ENST00000485705 SLC7A5P1Q8MH63 180 aa10.73□□□□□ -0.69
RPUSD3-217ENST00000485705 PRADC1Q9BSG0 188 aa10.73□□□□□ -0.69
RPUSD3-217ENST00000485705 A0A1B0GUT8 65 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 MT-ND4LP03901 98 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 MGPP08493 103 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 TRGC1P0CF51 173 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 SMIM17P0DL12 118 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 ZNF56Q15929 161 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 MRPL23Q16540 153 aaKnown RBP10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 CARHSP1Q9Y2V2 147 aaKnown RBP10.72□□□□□ -0.69
RPUSD3-217ENST00000485705 F5H697 171 aa10.71□□□□□ -0.69
RPUSD3-217ENST00000485705 PPP1R2P9O14990 202 aa10.71□□□□□ -0.69
RPUSD3-217ENST00000485705 RAB4BP61018 213 aa10.71□□□□□ -0.69
RPUSD3-217ENST00000485705 ESRGQ1W209 222 aa10.71□□□□□ -0.69
RPUSD3-217ENST00000485705 BORCS7Q96B45 105 aa10.71□□□□□ -0.69
RPUSD3-217ENST00000485705 ANAPC16Q96DE5 110 aa10.71□□□□□ -0.69
RPUSD3-217ENST00000485705 RYR2Q92736 4967 aa10.71□□□□□ -0.7
RPUSD3-217ENST00000485705 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 SRIP30626 198 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 GAGE1Q13065 139 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 GAGE4Q13068 117 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 GAGE5Q13069 117 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 LINC00588Q9Y4M8 146 aa10.7□□□□□ -0.7
RPUSD3-217ENST00000485705 NEGR1Q7Z3B1 354 aa10.69□□□□□ -0.7
RPUSD3-217ENST00000485705 UBE2DNLQ8IWF7 75 aa10.69□□□□□ -0.7
RPUSD3-217ENST00000485705 EPPK1P58107 5090 aaKnown RBP10.69□□□□□ -0.7
RPUSD3-217ENST00000485705 LINC00694P0DN24 101 aa10.68□□□□□ -0.7
RPUSD3-217ENST00000485705 CCL18P55774 89 aa10.68□□□□□ -0.7
RPUSD3-217ENST00000485705 FAM3BP58499 235 aaPredicted RBP10.68□□□□□ -0.7
RPUSD3-217ENST00000485705 RIGQ13278 110 aa10.68□□□□□ -0.7
RPUSD3-217ENST00000485705 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
RPUSD3-217ENST00000485705 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
RPUSD3-217ENST00000485705 M0QY20 66 aa10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 SMIM15Q7Z3B0 74 aa10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 CLRN3Q8NCR9 226 aa10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 KRTAP17-1Q9BYP8 105 aa10.67□□□□□ -0.7
RPUSD3-217ENST00000485705 TRAV26-2A0A0B4J265 109 aa10.66□□□□□ -0.7
RPUSD3-217ENST00000485705 TRBV10-1A0A0K0K1A3 114 aa10.66□□□□□ -0.7
RPUSD3-217ENST00000485705 C7orf77A4D0Y5 90 aa10.66□□□□□ -0.7
RPUSD3-217ENST00000485705 APOC3P02656 99 aa10.66□□□□□ -0.7
RPUSD3-217ENST00000485705 CAMPP49913 170 aa10.66□□□□□ -0.7
RPUSD3-217ENST00000485705 TMEM191AQ9H0A3 160 aa10.66□□□□□ -0.7
RPUSD3-217ENST00000485705 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms