RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
SMC4-216ENST00000485645 EIF5AL1Q6IS14 154 aaKnown RBP11.43□□□□□ -0.58
SMC4-216ENST00000485645 Q86TA4 180 aa11.43□□□□□ -0.58
SMC4-216ENST00000485645 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
SMC4-216ENST00000485645 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
SMC4-216ENST00000485645 HAMPP81172 84 aa11.42□□□□□ -0.58
SMC4-216ENST00000485645 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
SMC4-216ENST00000485645 SYT8Q8NBV8 401 aa11.42□□□□□ -0.58
SMC4-216ENST00000485645 JPT2Q9H910 190 aa11.42□□□□□ -0.58
SMC4-216ENST00000485645 TRAV8-3A0A0A6YYJ7 113 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 H3BVH4 76 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 PAGE4O60829 102 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 RAB5CP51148 216 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 UFSP1Q6NVU6 142 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 SLC51BQ86UW2 128 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 Q8N3U1 123 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 SAMD10Q9BYL1 202 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
SMC4-216ENST00000485645 A0A087WWC5 75 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 A0A1B0GV50 99 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 KRBOX1C9JBD0 128 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 CRIP1P50238 77 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 TOR2AQ5JU69 321 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 DNLZQ5SXM8 178 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
SMC4-216ENST00000485645 ZC2HC1AQ96GY0 325 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 Q9UF83 564 aa11.4□□□□□ -0.58
SMC4-216ENST00000485645 DMBT1Q9UGM3 2413 aaPredicted RBP11.39□□□□□ -0.59
SMC4-216ENST00000485645 M0R036 132 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 RHODO00212 210 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 SH2D1AO60880 128 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 UBE2G1P62253 170 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 FAM162BQ5T6X4 162 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 COX8CQ7Z4L0 72 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 DAZ4Q86SG3 579 aaKnown RBP11.39□□□□□ -0.59
SMC4-216ENST00000485645 FMC1Q96HJ9 113 aa11.39□□□□□ -0.59
SMC4-216ENST00000485645 DAZ3Q9NR90 486 aaKnown RBP11.39□□□□□ -0.59
SMC4-216ENST00000485645 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 GRIFINA4D1Z8 144 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 SULT1A2P50226 295 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 C9orf62Q8N4C0 152 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 PHLDA3Q9Y5J5 127 aa11.38□□□□□ -0.59
SMC4-216ENST00000485645 WFDC2Q14508 124 aa11.37□□□□□ -0.59
SMC4-216ENST00000485645 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
SMC4-216ENST00000485645 SRRM2Q9UQ35 2752 aaKnown RBP11.37□□□□□ -0.59
SMC4-216ENST00000485645 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 AKR1C3P42330 323 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 ZNF674Q2M3X9 581 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 COX11Q9Y6N1 276 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 URGCP-MRPS24S4R325 110 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
SMC4-216ENST00000485645 MYCBP2O75592 4640 aa11.36□□□□□ -0.59
SMC4-216ENST00000485645 A0A087WWL8 130 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 TEX46H3BTG2 121 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 M0R381 172 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 LECT2O14960 151 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 LTAP01374 205 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 S100A9P06702 114 aaKnown RBP11.35□□□□□ -0.59
SMC4-216ENST00000485645 CCL20P78556 96 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 MANBALQ9NQG1 85 aa11.35□□□□□ -0.59
SMC4-216ENST00000485645 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
SMC4-216ENST00000485645 NIT1Q86X76 327 aa11.34□□□□□ -0.59
SMC4-216ENST00000485645 ZFP82Q8N141 532 aa11.34□□□□□ -0.59
SMC4-216ENST00000485645 RMI2Q96E14 147 aa11.34□□□□□ -0.59
SMC4-216ENST00000485645 GNG13Q9P2W3 67 aa11.34□□□□□ -0.59
SMC4-216ENST00000485645 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.33□□□□□ -0.6
SMC4-216ENST00000485645 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
SMC4-216ENST00000485645 TRBV10-1A0A0K0K1A3 114 aa11.32□□□□□ -0.6
SMC4-216ENST00000485645 RPL36AP83881 106 aaKnown RBP11.32□□□□□ -0.6
SMC4-216ENST00000485645 RPL36ALQ969Q0 106 aaKnown RBP11.32□□□□□ -0.6
SMC4-216ENST00000485645 IGKV2D-24A0A075B6R9 120 aa11.31□□□□□ -0.6
SMC4-216ENST00000485645 A0A087WX48 190 aa11.31□□□□□ -0.6
SMC4-216ENST00000485645 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
SMC4-216ENST00000485645 Q6ZSA8 131 aa11.31□□□□□ -0.6
SMC4-216ENST00000485645 KLK12Q9UKR0 248 aa11.31□□□□□ -0.6
SMC4-216ENST00000485645 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
SMC4-216ENST00000485645 ELOBQ15370 118 aa11.3□□□□□ -0.6
SMC4-216ENST00000485645 Q8N976 141 aa11.3□□□□□ -0.6
SMC4-216ENST00000485645 C11orf52Q96A22 123 aa11.3□□□□□ -0.6
SMC4-216ENST00000485645 CHCHD7Q9BUK0 85 aa11.3□□□□□ -0.6
SMC4-216ENST00000485645 IFNA1P01562 189 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 UBE2D3P61077 147 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 UBE2D2P62837 147 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 UBE2WQ96B02 151 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 DNAJC30Q96LL9 226 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
SMC4-216ENST00000485645 RBFOX3A6NFN3 312 aa11.28□□□□□ -0.6
SMC4-216ENST00000485645 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
SMC4-216ENST00000485645 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
SMC4-216ENST00000485645 NKX2-5P52952 324 aaPredicted RBP11.28□□□□□ -0.6
SMC4-216ENST00000485645 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
SMC4-216ENST00000485645 RAB4BP61018 213 aa11.27□□□□□ -0.61
SMC4-216ENST00000485645 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms