RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 RAB4AP20338 218 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 Q8NAQ8 132 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 RNF185Q96GF1 192 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 TP53TG1Q9Y2A0 90 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 PHOX2AO14813 284 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 MRPL51Q4U2R6 128 aaKnown RBP12.51□□□□□ -0.41
CCDC78-214ENST00000485091 RASL10AQ92737 203 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 PTH2Q96A98 100 aa12.51□□□□□ -0.41
CCDC78-214ENST00000485091 SMKR1H3BMG3 65 aa12.5□□□□□ -0.41
CCDC78-214ENST00000485091 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
CCDC78-214ENST00000485091 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
CCDC78-214ENST00000485091 NCR2O95944 276 aa12.49□□□□□ -0.41
CCDC78-214ENST00000485091 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
CCDC78-214ENST00000485091 CRYGDP07320 174 aa12.49□□□□□ -0.41
CCDC78-214ENST00000485091 A8MWV9 139 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 F5H697 171 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 DEFB130BP0DP73 79 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 DEFB130AP0DP74 79 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 SRIP30626 198 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 RAB5BP61020 215 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 LGALS9BQ3B8N2 356 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 NBEAL2Q6ZNJ1 2754 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 TRGV2A0A075B6R0 118 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 D6R8Y8 96 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 GAS8-AS1O95177 125 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 CKS2P33552 79 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 ZNF56Q15929 161 aa12.48□□□□□ -0.41
CCDC78-214ENST00000485091 RS1O15537 224 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 LINC00315P59091 139 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
CCDC78-214ENST00000485091 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 OR4C5Q8NGB2 326 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
CCDC78-214ENST00000485091 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-214ENST00000485091 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
CCDC78-214ENST00000485091 ZNF479Q96JC4 524 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 TM2D3Q9BRN9 247 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 ALKBH7Q9BT30 221 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-214ENST00000485091 CELA1Q9UNI1 258 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 SUMO4Q6EEV6 95 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 ORMDL3Q8N138 153 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 PRELID3AQ96N28 172 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 DKK2Q9UBU2 259 aa12.45□□□□□ -0.42
CCDC78-214ENST00000485091 NDUFAF3Q9BU61 184 aa12.44□□□□□ -0.42
CCDC78-214ENST00000485091 TRAV4A0A0B4J268 109 aa12.43□□□□□ -0.42
CCDC78-214ENST00000485091 LYRM9A8MSI8 78 aa12.43□□□□□ -0.42
CCDC78-214ENST00000485091 IQCJQ1A5X6 159 aa12.43□□□□□ -0.42
CCDC78-214ENST00000485091 NDUFA6P56556 154 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 UFSP1Q6NVU6 142 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 Q6ZSN1 163 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 MRAP2Q96G30 205 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 U3KQK5 164 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 NPYP01303 97 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 RPL39LQ96EH5 51 aaKnown RBP12.42□□□□□ -0.42
CCDC78-214ENST00000485091 ZMAT4Q9H898 229 aa12.42□□□□□ -0.42
CCDC78-214ENST00000485091 A0A0J9YWU9 116 aa12.41□□□□□ -0.42
CCDC78-214ENST00000485091 LOC389332A0A1B0GUA5 103 aa12.41□□□□□ -0.42
CCDC78-214ENST00000485091 RHODO00212 210 aa12.41□□□□□ -0.42
CCDC78-214ENST00000485091 PPBPP02775 128 aa12.41□□□□□ -0.42
CCDC78-214ENST00000485091 DAD1P61803 113 aa12.41□□□□□ -0.42
CCDC78-214ENST00000485091 LINC00612Q8N6U2 182 aa12.41□□□□□ -0.42
CCDC78-214ENST00000485091 TNFRSF6BO95407 300 aa12.4□□□□□ -0.42
CCDC78-214ENST00000485091 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
CCDC78-214ENST00000485091 NACAE9PAV3 2078 aa12.4□□□□□ -0.42
CCDC78-214ENST00000485091 P0DMU3 169 aa12.4□□□□□ -0.43
CCDC78-214ENST00000485091 FAM231AP0DMU4 169 aa12.4□□□□□ -0.43
CCDC78-214ENST00000485091 FAM231CP0DMU5 169 aa12.4□□□□□ -0.43
CCDC78-214ENST00000485091 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.43
CCDC78-214ENST00000485091 B9D2Q9BPU9 175 aa12.4□□□□□ -0.43
CCDC78-214ENST00000485091 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
CCDC78-214ENST00000485091 S100A6P06703 90 aa12.39□□□□□ -0.43
CCDC78-214ENST00000485091 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
CCDC78-214ENST00000485091 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
CCDC78-214ENST00000485091 NRACQ8N912 160 aa12.39□□□□□ -0.43
CCDC78-214ENST00000485091 M0QY20 66 aa12.38□□□□□ -0.43
CCDC78-214ENST00000485091 C11orf68Q9H3H3 251 aaKnown RBP12.38□□□□□ -0.43
CCDC78-214ENST00000485091 Q0VG73 95 aa12.37□□□□□ -0.43
CCDC78-214ENST00000485091 FHL2Q14192 279 aa12.37□□□□□ -0.43
CCDC78-214ENST00000485091 MAP1LC3AQ9H492 121 aa12.37□□□□□ -0.43
CCDC78-214ENST00000485091 Q9UF83 564 aa12.37□□□□□ -0.43
CCDC78-214ENST00000485091 HUWE1Q7Z6Z7 4374 aaKnown RBP12.36□□□□□ -0.43
CCDC78-214ENST00000485091 HTN3P15516 51 aa12.36□□□□□ -0.43
CCDC78-214ENST00000485091 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
CCDC78-214ENST00000485091 LAMTOR2Q9Y2Q5 125 aa12.36□□□□□ -0.43
CCDC78-214ENST00000485091 H7C1H1 209 aa12.35□□□□□ -0.43
CCDC78-214ENST00000485091 PRSS3P2Q8NHM4 247 aa12.35□□□□□ -0.43
CCDC78-214ENST00000485091 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms