RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PEX7O00628 323 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 Q8N814 137 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PTH2Q96A98 100 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 GTSF1LQ9H1H1 148 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
HLA-DQB1-208ENST00000484729 LRP1Q07954 4544 aaKnown RBP10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 TRAV34A0A0B4J273 112 aa10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 S100A4P26447 101 aaKnown RBP10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 CCL20P78556 96 aa10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 HIST1H2BAQ96A08 127 aa10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 TCEAL7Q9BRU2 100 aa10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 PARLQ9H300 379 aa10.2□□□□□ -0.78
HLA-DQB1-208ENST00000484729 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 ASIPP42127 132 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 AKR1C3P42330 323 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 GAGE1Q13065 139 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 GAGE4Q13068 117 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 GAGE5Q13069 117 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 TEX261Q6UWH6 196 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 LINC00479Q96M42 142 aa10.19□□□□□ -0.78
HLA-DQB1-208ENST00000484729 A8MWV9 139 aa10.18□□□□□ -0.78
HLA-DQB1-208ENST00000484729 UBE2G1P62253 170 aa10.18□□□□□ -0.78
HLA-DQB1-208ENST00000484729 Q8N3U1 123 aa10.18□□□□□ -0.78
HLA-DQB1-208ENST00000484729 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
HLA-DQB1-208ENST00000484729 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 SCO2A0A1W2PP80 73 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 BCL2P10415 239 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 LAGE3Q14657 143 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 ZFP2Q6ZN57 461 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 Q86TA4 180 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
HLA-DQB1-208ENST00000484729 FABP5P3A8MUU1 101 aa10.16□□□□□ -0.78
HLA-DQB1-208ENST00000484729 H3BVH4 76 aa10.16□□□□□ -0.78
HLA-DQB1-208ENST00000484729 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB1-208ENST00000484729 MEF2BQ02080 365 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB1-208ENST00000484729 JPT2Q9H910 190 aa10.16□□□□□ -0.78
HLA-DQB1-208ENST00000484729 M0R036 132 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 WFDC2Q14508 124 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 SAMD10Q9BYL1 202 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 VAX2Q9UIW0 290 aa10.15□□□□□ -0.78
HLA-DQB1-208ENST00000484729 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 B4DEV8 164 aa10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 LECT2O14960 151 aa10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 Q6ZSA8 131 aa10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 DAZ4Q86SG3 579 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 C14orf178Q8N769 122 aaPredicted RBP10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 DAZ3Q9NR90 486 aaKnown RBP10.14□□□□□ -0.79
HLA-DQB1-208ENST00000484729 DNAH8Q96JB1 4490 aa10.13□□□□□ -0.79
HLA-DQB1-208ENST00000484729 RHODO00212 210 aa10.13□□□□□ -0.79
HLA-DQB1-208ENST00000484729 PDE6DO43924 150 aa10.13□□□□□ -0.79
HLA-DQB1-208ENST00000484729 TOR2AQ5JU69 321 aa10.13□□□□□ -0.79
HLA-DQB1-208ENST00000484729 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
HLA-DQB1-208ENST00000484729 Q9UF83 564 aa10.13□□□□□ -0.79
HLA-DQB1-208ENST00000484729 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 A0A087WWC5 75 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 GRIFINA4D1Z8 144 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 SH2D1AO60880 128 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 S100A9P06702 114 aaKnown RBP10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 ARMS2P0C7Q2 107 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 UFSP1Q6NVU6 142 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 ZC2HC1AQ96GY0 325 aa10.12□□□□□ -0.79
HLA-DQB1-208ENST00000484729 TRBV6-1A0A0K0K1D8 114 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 RBFOX3A6NFN3 312 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 KRBOX1C9JBD0 128 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 OXTP01178 125 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 CRIP1P50238 77 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 EIF5A2Q9GZV4 153 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 ZFP30Q9Y2G7 519 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 URGCP-MRPS24S4R325 110 aa10.11□□□□□ -0.79
HLA-DQB1-208ENST00000484729 A0A087WWL8 130 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 TMSB15BA0A087X1C1 80 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 LTAP01374 205 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 RPL35P42766 123 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 RAB14P61106 215 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 LINC01620Q4KN68 170 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 FAM162BQ5T6X4 162 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 DERL1Q9BUN8 251 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 MED9Q9NWA0 146 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
HLA-DQB1-208ENST00000484729 M0R381 172 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 DNLZQ5SXM8 178 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 SCXQ7RTU7 201 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 RMI2Q96E14 147 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 FAM210AQ96ND0 272 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
HLA-DQB1-208ENST00000484729 IGKV2D-24A0A075B6R9 120 aa10.08□□□□□ -0.8
HLA-DQB1-208ENST00000484729 CEBPGP53567 150 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms