RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 MRPL54Q6P161 138 aaKnown RBP4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 Q8NAQ8 132 aa4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 RASL10AQ92737 203 aa4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 FRZBQ92765 325 aa4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 YPEL4Q96NS1 127 aa4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 GNB1LQ9BYB4 327 aa4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 TMEM191AQ9H0A3 160 aa4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 C11orf68Q9H3H3 251 aaKnown RBP4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 NOP10Q9NPE3 64 aaKnown RBP4.67□□□□□ -1.66
PDZRN3-209ENST00000484487 MUC21A0A0G2JKD1 596 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 MUC21A0A140T8X8 626 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 A0A1B0GXF2 115 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 PLAC8L1A1L4L8 177 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 COLCA2A8K830 154 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 RHODO00212 210 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 HLA-DQA1P01909 254 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 PRM2P04554 102 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 EMP1P54849 157 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 SSTP61278 116 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 GATD1Q8NB37 220 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 C18orf15Q96N68 181 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 DPH3P1Q9H4G8 78 aa4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 HUWE1Q7Z6Z7 4374 aaKnown RBP4.66□□□□□ -1.66
PDZRN3-209ENST00000484487 TRGV2A0A075B6R0 118 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 TRAV4A0A0B4J268 109 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 RS1O15537 224 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 RAB5AP20339 215 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 RPS10P46783 165 aaKnown RBP4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 FAM222AQ5U5X8 452 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 ZFP2Q6ZN57 461 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 Q6ZTI0 123 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 LINC00612Q8N6U2 182 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 OR4C5Q8NGB2 326 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 RETNQ9HD89 108 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 MRPL16Q9NX20 251 aaKnown RBP4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 MSRB1Q9NZV6 116 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 DKK2Q9UBU2 259 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 TRAPPC1Q9Y5R8 145 aa4.65□□□□□ -1.67
PDZRN3-209ENST00000484487 TENM3Q9P273 2699 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 GAGE12BA1L429 117 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 F5H697 171 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 H7C1H1 209 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 GAGE7O76087 117 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 PPP1R17O96001 155 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 APCSP02743 223 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 PPBPP02775 128 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 GAGE12FP0CL80 117 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 GAGE12GP0CL81 117 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 GAGE12IP0CL82 117 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 DEFB130BP0DP73 79 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 DEFB130AP0DP74 79 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 EVI2AP22794 236 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 DAD1P61803 113 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 SLAQ13239 276 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 CFAP126Q5VTH2 177 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 FAM104BQ5XKR9 115 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 TMEM136Q6ZRR5 245 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 C14orf178Q8N769 122 aaPredicted RBP4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 MRAP2Q96G30 205 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 MEGF8Q7Z7M0 2845 aa4.64□□□□□ -1.67
PDZRN3-209ENST00000484487 COL7A1Q02388 2944 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 A0A087WWL8 130 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 A0A0J9YWU9 116 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 DEFB4AO15263 64 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 ATP5G1P05496 136 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 CRYGDP07320 174 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 MGPP08493 103 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 RAB4AP20338 218 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 CKS2P33552 79 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 FABP9Q0Z7S8 132 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 ZNF56Q15929 161 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 FAM74A4Q5TZK3 123 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 POM121L12Q8N7R1 296 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 C11orf45Q8TAV5 145 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 KIF25-AS1Q9Y6Z4 181 aa4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
PDZRN3-209ENST00000484487 PRKDCP78527 4128 aaKnown RBP4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 TRGV4A0A0C4DH28 118 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 IGHV3-53P01767 116 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 MRPL51Q4U2R6 128 aaKnown RBP4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 AMN1Q8IY45 258 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 ORMDL3Q8N138 153 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 JPT2Q9H910 190 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 EDA2RQ9HAV5 297 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 LAMTOR2Q9Y2Q5 125 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 U3KQK5 164 aa4.62□□□□□ -1.67
PDZRN3-209ENST00000484487 TRBV10-1A0A0K0K1A3 114 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 TRBV6-4A0A1B0GX49 114 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 C1orf196B1AJZ1 125 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 H3BS24 57 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 PHOX2AO14813 284 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 TRGC2P03986 189 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 LINC00315P59091 139 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 C12orf74Q32Q52 190 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 SUMO4Q6EEV6 95 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 UFSP1Q6NVU6 142 aa4.61□□□□□ -1.67
PDZRN3-209ENST00000484487 RNF185Q96GF1 192 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms