RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 NEGR1Q7Z3B1 354 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 NHLRC2Q8NBF2 726 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 PRADC1Q9BSG0 188 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-213ENST00000484112 Q9H8V8 135 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 CARHSP1Q9Y2V2 147 aaKnown RBP6.89□□□□□ -1.31
CPSF4-213ENST00000484112 MRPS16Q9Y3D3 137 aaKnown RBP6.89□□□□□ -1.31
CPSF4-213ENST00000484112 LY96Q9Y6Y9 160 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
CPSF4-213ENST00000484112 A0A1W2PPQ1 181 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 C19orf71A6NCJ1 209 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 K7EP13 123 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 K7EQD1 137 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 SNAI2O43623 268 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 NXPH4O95158 308 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 SFTA3P0C7M3 94 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 TIRAPP58753 221 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 RHOHQ15669 191 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 SEC11CQ9BY50 192 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 PARLQ9H300 379 aa6.88□□□□□ -1.31
CPSF4-213ENST00000484112 TRBV20OR9-2A0A075B6H5 130 aa6.87□□□□□ -1.31
CPSF4-213ENST00000484112 GRIFINA4D1Z8 144 aa6.87□□□□□ -1.31
CPSF4-213ENST00000484112 P01737 135 aa6.87□□□□□ -1.31
CPSF4-213ENST00000484112 SRSF3P84103 164 aaKnown RBP6.87□□□□□ -1.31
CPSF4-213ENST00000484112 PEA15Q15121 130 aa6.87□□□□□ -1.31
CPSF4-213ENST00000484112 ESRGQ1W209 222 aa6.87□□□□□ -1.31
CPSF4-213ENST00000484112 TTC32Q5I0X7 151 aa6.87□□□□□ -1.31
CPSF4-213ENST00000484112 EIF5A2Q9GZV4 153 aaKnown RBP6.87□□□□□ -1.31
CPSF4-213ENST00000484112 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
CPSF4-213ENST00000484112 TMSB15BA0A087X1C1 80 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 F2Z2F3 143 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 GYPEP15421 78 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 ADCYAP1P18509 176 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
CPSF4-213ENST00000484112 CACNG7P62955 275 aa6.85□□□□□ -1.31
CPSF4-213ENST00000484112 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
CPSF4-213ENST00000484112 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
CPSF4-213ENST00000484112 FAM231DQ6ZW35 169 aa6.85□□□□□ -1.31
CPSF4-213ENST00000484112 SVBPQ8N300 66 aa6.85□□□□□ -1.31
CPSF4-213ENST00000484112 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
CPSF4-213ENST00000484112 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 C9JQL5 133 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 F8W036 122 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 M0R381 172 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 APOC3P02656 99 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 IGLC6P0CF74 106 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPSF4-213ENST00000484112 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
CPSF4-213ENST00000484112 SPANXN1Q5VSR9 72 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 FER1L6-AS1Q8NA97 138 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
CPSF4-213ENST00000484112 TRAV9-2A0A087WT02 112 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 SIVA1O15304 175 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 SNAPINO95295 136 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 CRYGDP07320 174 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 SRP19P09132 144 aaKnown RBP6.83□□□□□ -1.32
CPSF4-213ENST00000484112 RAB4BP61018 213 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 CT83Q5H943 113 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 NUDT10Q8NFP7 164 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 OR10AG1Q8NH19 301 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 NUDT11Q96G61 164 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 AP1S3Q96PC3 154 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
CPSF4-213ENST00000484112 RPP21Q9H633 154 aaKnown RBP6.83□□□□□ -1.32
CPSF4-213ENST00000484112 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 K7EN84 100 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 SMIM17P0DL12 118 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 LINC00694P0DN24 101 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 FAM74A4Q5TZK3 123 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 SAMD10Q9BYL1 202 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 GTSF1LQ9H1H1 148 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 HERC1Q15751 4861 aa6.82□□□□□ -1.32
CPSF4-213ENST00000484112 A0A087WWC5 75 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 TRAV8-6A0A0B4J262 113 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 FAM231BA6NCW3 169 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 A8MWL6 223 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 TRGC1P0CF51 173 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 CTRLP40313 264 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 LINC00315P59091 139 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 ATRAIDQ6UW56 229 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 LINC01551Q86U37 167 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 OR10G8Q8NGN5 311 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 ATP6V0E2Q8NHE4 81 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 JPT2Q9H910 190 aa6.81□□□□□ -1.32
CPSF4-213ENST00000484112 A0A087WWL8 130 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 H7C1H1 209 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 EREGO14944 169 aa6.8□□□□□ -1.32
CPSF4-213ENST00000484112 GATCO43716 136 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 1522.3 ms