RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 PFN4Q8NHR9 129 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 FAM167A-AS1Q96KT0 104 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 B9D2Q9BPU9 175 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 RETNLBQ9BQ08 111 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 SND1-IT1Q9HBX3 110 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 C14orf132Q9NPU4 83 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 HILPDAQ9Y5L2 63 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 PIK3C2AO00443 1686 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 DOCK9Q9BZ29 2069 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 TCHHQ07283 1943 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ASXL1Q8IXJ9 1541 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 LAMB4A4D0S4 1761 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 CITO14578 2027 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 KIAA0556O60303 1618 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 NESP48681 1621 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 NUP210Q8TEM1 1887 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-213ENST00000484088 ABCA3Q99758 1704 aa1.18□□□□□ -2.22
ITGB1-213ENST00000484088 TRIP11Q15643 1979 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 OTOFQ9HC10 1997 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 SCN10AQ9Y5Y9 1956 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 LAMC3Q9Y6N6 1575 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 PTPRFP10586 1907 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 ATG2AQ2TAZ0 1938 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 DENND4CQ5VZ89 1909 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 PPLO60437 1756 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 TRBV25-1A0A075B6N4 114 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 TRAV23DV6A0A075B6W5 121 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV3-73A0A0B4J1V6 119 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 IGKV1-12A0A0C4DH73 117 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 A6NED7 52 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 A6NN06 94 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 C16orf90A8MZG2 172 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 H7BZZ5 65 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 GNRH2O43555 120 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 PPP1R17O96001 155 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 IGKV1D-12P01611 117 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 HMGA1P17096 107 aaKnown RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 CD24P25063 80 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 EFNA4P52798 201 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 FXYD2P54710 66 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 CMC4P56277 68 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 EDDM3BP56851 147 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 C9orf116Q5BN46 136 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 SPANXN5Q5MJ07 72 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 KPRPQ5T749 579 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 Q6JHZ5 121 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 C2orf82Q6UX34 121 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 C16orf47Q6ZP98 133 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 SDIM1Q6ZPB5 146 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 LYZL2Q7Z4W2 148 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 C20orf197Q8N268 126 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 ZFAND2AQ8N6M9 145 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 SPTSSBQ8NFR3 76 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 SMCR5Q8TEV8 140 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 RNASE6Q93091 150 aaKnown RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 PLA2G12AQ9BZM1 189 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 C11orf1Q9H5F2 150 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 LINC00574Q9H8X3 128 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 CDC42SE1Q9NRR8 79 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 IQGAP3Q86VI3 1631 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 EIF2AK4Q9P2K8 1649 aaKnown RBP1.17□□□□□ -2.22
ITGB1-213ENST00000484088 DOCK8Q8NF50 2099 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 ARHGEF5Q12774 1597 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 MAST1Q9Y2H9 1570 aa1.17□□□□□ -2.22
ITGB1-213ENST00000484088 TRIOBPQ9H2D6 2365 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 ZNF142P52746 1687 aaPredicted RBP1.16□□□□□ -2.22
ITGB1-213ENST00000484088 NUP210LQ5VU65 1888 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 CPS1P31327 1500 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 AGLP35573 1532 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 MYO3AQ8NEV4 1616 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGLV3-12A0A075B6K2 115 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV3OR16-8A0A075B7F1 116 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGLV3-32A0A0A0MS00 114 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV1-3A0A0C4DH29 117 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 TMEM30CPA0ZSE6 113 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 TMEM14DPA8MWL7 114 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IQCF6A8MYZ5 107 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 HCG22E2RYF7 251 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 LY6HO94772 140 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 LHBP01229 141 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGKV1-39P01597 117 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGHV1-46P01743 117 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 IGKV1D-39P04432 117 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 BAALC-AS2P0C853 105 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 CCL3P10147 92 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 MGST1P10620 155 aaKnown RBP1.16□□□□□ -2.22
ITGB1-213ENST00000484088 MIFP14174 115 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 SUPT4H1P63272 117 aaKnown RBP1.16□□□□□ -2.22
ITGB1-213ENST00000484088 KISS1Q15726 138 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 LUZP6Q538Z0 58 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 NCBP2-AS2Q69YL0 99 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 LYZL1Q6UWQ5 148 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 DYNAPQ8N1N2 210 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 MIR7-3HGQ8N6C7 128 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 Q8N6K4 173 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 TMEM254Q8TBM7 123 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 TTTY13Q9BZ97 58 aa1.16□□□□□ -2.22
ITGB1-213ENST00000484088 MAP2P11137 1827 aaKnown RBP1.16□□□□□ -2.22
ITGB1-213ENST00000484088 VWA8A3KMH1 1905 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms