RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 FAM231AP0DMU4 169 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 FAM231CP0DMU5 169 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 MIAQ16674 131 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 LTBRP36941 435 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 CRIPAKQ8N1N5 446 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 FLVCR1-AS1Q8TAF5 88 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 MSRB1Q9NZV6 116 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 COX7A2LO14548 114 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 MRPS36P82909 103 aaKnown RBP8.03□□□□□ -1.12
COL12A1-207ENST00000483888 ARTNQ5T4W7 220 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
COL12A1-207ENST00000483888 EP300Q09472 2414 aaPredicted RBP8.02□□□□□ -1.13
COL12A1-207ENST00000483888 DEFB130BP0DP73 79 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 DEFB130AP0DP74 79 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 MINOS1Q5TGZ0 78 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 MINOS1-NBL1R4GNA1 71 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 PDE6GP18545 87 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 USP17L23D6RBM5 183 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 UBE2BP63146 152 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 UBE2AP49459 152 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 TRIAP1O43715 76 aa8.02□□□□□ -1.13
COL12A1-207ENST00000483888 IGHV4OR15-8A0A075B7B6 117 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 A0A087WW49 117 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 CSRP1P21291 193 aaKnown RBP8.01□□□□□ -1.13
COL12A1-207ENST00000483888 SPRY2O43597 315 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
COL12A1-207ENST00000483888 SPRR3Q9UBC9 169 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 MDS2Q8NDY4 140 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 CMC4P56277 68 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-207ENST00000483888 CLPSP04118 112 aa8.01□□□□□ -1.13
COL12A1-207ENST00000483888 MRPL36Q9P0J6 103 aaKnown RBP8.01□□□□□ -1.13
COL12A1-207ENST00000483888 NCR3O14931 201 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 NFE4Q86UQ8 179 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 TP53TG3Q9ULZ0 132 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 GNLYP22749 145 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 PSCAO43653 123 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 DEFB131AP59861 70 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 BPY2O14599 106 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
COL12A1-207ENST00000483888 NDUFB1O75438 58 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 GDF5OSQ5U4N7 250 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 SOSTDC1Q6X4U4 206 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 PRR15LQ9BU68 103 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 IGHV1-58A0A0C4DH39 117 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 ANGP03950 147 aaKnown RBP7.99□□□□□ -1.13
COL12A1-207ENST00000483888 UFSP1Q6NVU6 142 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 C5orf38Q86SI9 138 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 COL5A1P20908 1838 aaPredicted RBP7.99□□□□□ -1.13
COL12A1-207ENST00000483888 LINC00526Q96FQ7 95 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 XCL2Q9UBD3 114 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 SCXQ7RTU7 201 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 OVOL3O00110 214 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 A0A1B0GXF2 115 aa7.99□□□□□ -1.13
COL12A1-207ENST00000483888 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 PINLYPA6NC86 204 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 C17orf58Q2M2W7 97 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 Q6ZS92 163 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 PIP4P2Q8N4L2 257 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 SAP25Q8TEE9 199 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 GP9P14770 177 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 LOXP28300 417 aaPredicted RBP7.98□□□□□ -1.13
COL12A1-207ENST00000483888 TIMM17AQ99595 171 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 IGLV3-12A0A075B6K2 115 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 IGHV3-30-3P0DP02 117 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 FOXL2NBQ6ZUU3 175 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 SPRY4Q9C004 299 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 MAPKAPK5-AS1Q8N8E1 139 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 TRBV27A0A0K0K1C4 114 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
COL12A1-207ENST00000483888 ZNF491Q8N8L2 437 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 CNOT1A5YKK6 2376 aaKnown RBP7.97□□□□□ -1.13
COL12A1-207ENST00000483888 BRWD3Q6RI45 1802 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 LYPD2Q6UXB3 125 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 FAM167A-AS1Q96KT0 104 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 C15orf65H3BRN8 121 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 RNASE6Q93091 150 aaKnown RBP7.97□□□□□ -1.13
COL12A1-207ENST00000483888 C11orf44Q8N8P7 122 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 PROK2Q9HC23 129 aa7.97□□□□□ -1.13
COL12A1-207ENST00000483888 KLK5Q9Y337 293 aaPredicted RBP7.97□□□□□ -1.13
COL12A1-207ENST00000483888 ATP6V0E1O15342 81 aa7.96□□□□□ -1.13
COL12A1-207ENST00000483888 IGHV1-69P01742 117 aa7.96□□□□□ -1.13
COL12A1-207ENST00000483888 CD59P13987 128 aa7.96□□□□□ -1.13
COL12A1-207ENST00000483888 NOTCH4Q99466 2003 aa7.96□□□□□ -1.13
COL12A1-207ENST00000483888 MIR7-3HGQ8N6C7 128 aa7.96□□□□□ -1.13
COL12A1-207ENST00000483888 IGHV3-33P01772 117 aa7.96□□□□□ -1.14
COL12A1-207ENST00000483888 IGKV4-1P06312 121 aa7.96□□□□□ -1.14
COL12A1-207ENST00000483888 LRCOL1A6NCL2 159 aa7.96□□□□□ -1.14
COL12A1-207ENST00000483888 FAM110DQ8TAY7 271 aaPredicted RBP7.96□□□□□ -1.14
COL12A1-207ENST00000483888 Q8TCH9 128 aa7.95□□□□□ -1.14
COL12A1-207ENST00000483888 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
COL12A1-207ENST00000483888 C5orf67F2Z3F1 127 aa7.95□□□□□ -1.14
COL12A1-207ENST00000483888 LENEPQ9Y5L5 61 aa7.95□□□□□ -1.14
COL12A1-207ENST00000483888 FAM19A3Q7Z5A8 133 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 WDR90Q96KV7 1748 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 C19orf71A6NCJ1 209 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 ACACAQ13085 2346 aa7.94□□□□□ -1.14
COL12A1-207ENST00000483888 GVINP1Q7Z2Y8 2422 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms