RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CLPSL2Q6UWE3 100 aa6.85□□□□□ -1.31
SMARCC1-205ENST00000483847 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
SMARCC1-205ENST00000483847 NUDT15Q9NV35 164 aa6.85□□□□□ -1.31
SMARCC1-205ENST00000483847 TRBV6-8A0A0A6YYG3 113 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 H3BVH4 76 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 RHODO00212 210 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 SIX6O95475 246 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 FLI1Q01543 452 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 MIAQ16674 131 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 PRNTQ86SH4 94 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 SPACA4Q8TDM5 124 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 IL36BQ9NZH7 164 aa6.84□□□□□ -1.31
SMARCC1-205ENST00000483847 MUC2Q02817 5179 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 SLPIP03973 132 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 RAB2AP61019 212 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 PRR3P79522 188 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 ZFP69Q49AA0 526 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 LRRC37A5PQ49AS3 106 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 WDR73Q6P4I2 378 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 PQLC2Q6ZP29 291 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 RNF185Q96GF1 192 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
SMARCC1-205ENST00000483847 TRBV7-3A0A075B6L6 115 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 SERTM2A0A1B0GWG4 89 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 LYRM1O43325 122 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 ARMS2P0C7Q2 107 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 RPL36AP83881 106 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 C5orf17Q8NAS9 161 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 RPL36ALQ969Q0 106 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 SFRP2Q96HF1 295 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 CHCHD5Q9BSY4 110 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
SMARCC1-205ENST00000483847 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 TRBV10-1A0A0K0K1A3 114 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 hDV102S1A0JD36 115 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 GRIFINA4D1Z8 144 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 K7EQM0 130 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 PTTG1O95997 202 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 H2AFB2P0C5Z0 115 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 ARL14EPLP0DKL9 152 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 CLRN3Q8NCR9 226 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 OR11H4Q8NGC9 324 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 SMIM3Q9BZL3 60 aa6.81□□□□□ -1.32
SMARCC1-205ENST00000483847 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 MUC21A0A0G2JKD1 596 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 A0A1W2PPV4 95 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 CCDC160A6NGH7 325 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 B4DEV8 164 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 M0R036 132 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 RBX1P62877 108 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 OR10G8Q8NGN5 311 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 SCGB1C1Q8TD33 95 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 EPDR1Q9UM22 224 aa6.8□□□□□ -1.32
SMARCC1-205ENST00000483847 TRAV34A0A0B4J273 112 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 KRBOX1C9JBD0 128 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 M0R381 172 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 CRIP1P50238 77 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 SUMO1P63165 101 aaKnown RBP6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 SAPCD1Q5SSQ6 148 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 DNLZQ5SXM8 178 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 NEXN-AS1Q8NBZ9 246 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 WFDC1Q9HC57 220 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 HSPB11Q9Y547 144 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 ARL2-SNX15V9GYD0 113 aa6.79□□□□□ -1.32
SMARCC1-205ENST00000483847 GAGE6Q13070 117 aa6.78□□□□□ -1.32
SMARCC1-205ENST00000483847 LYPD6BQ8NI32 183 aa6.78□□□□□ -1.32
SMARCC1-205ENST00000483847 SUN5Q8TC36 379 aa6.78□□□□□ -1.32
SMARCC1-205ENST00000483847 RBM38Q9H0Z9 239 aaKnown RBP6.78□□□□□ -1.32
SMARCC1-205ENST00000483847 PHLDA3Q9Y5J5 127 aa6.78□□□□□ -1.32
SMARCC1-205ENST00000483847 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 STAG3L2P0CL84 134 aa6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 STAG3L3P0CL85 134 aa6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 GCHFRP30047 84 aa6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 COX6A2Q02221 97 aa6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 REG3GQ6UW15 175 aa6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
SMARCC1-205ENST00000483847 TMSB15BA0A087X1C1 80 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 SH2D1AO60880 128 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 TPT1P13693 172 aaKnown RBP6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 CDC34P49427 236 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 RAB5CP51148 216 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 PKIAP61925 76 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 REG3AQ06141 175 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 PRSS3P2Q8NHM4 247 aa6.76□□□□□ -1.33
SMARCC1-205ENST00000483847 RPL12P30050 165 aaKnown RBP6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 H2BFSP57053 126 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 RAB4BP61018 213 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms