RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.87□□□□□ -0.51
ATG4B-221ENST00000483778 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
ATG4B-221ENST00000483778 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
ATG4B-221ENST00000483778 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
ATG4B-221ENST00000483778 MAP1LC3B2A6NCE7 125 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 FAM162BQ5T6X4 162 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 Q6ZSA8 131 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 NIT1Q86X76 327 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 MAP1LC3BQ9GZQ8 125 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
ATG4B-221ENST00000483778 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
ATG4B-221ENST00000483778 M0R381 172 aa11.85□□□□□ -0.51
ATG4B-221ENST00000483778 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
ATG4B-221ENST00000483778 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-221ENST00000483778 ARPC5O15511 151 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 LTAP01374 205 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 FMC1Q96HJ9 113 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 KLK12Q9UKR0 248 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 PHLDA3Q9Y5J5 127 aa11.84□□□□□ -0.51
ATG4B-221ENST00000483778 A0A087WWC5 75 aa11.83□□□□□ -0.52
ATG4B-221ENST00000483778 C1QBP02746 253 aa11.83□□□□□ -0.52
ATG4B-221ENST00000483778 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
ATG4B-221ENST00000483778 TRBV6-1A0A0K0K1D8 114 aa11.82□□□□□ -0.52
ATG4B-221ENST00000483778 RHODO00212 210 aa11.82□□□□□ -0.52
ATG4B-221ENST00000483778 PAGE4O60829 102 aa11.82□□□□□ -0.52
ATG4B-221ENST00000483778 TPT1P13693 172 aaKnown RBP11.82□□□□□ -0.52
ATG4B-221ENST00000483778 UBE2G1P62253 170 aa11.82□□□□□ -0.52
ATG4B-221ENST00000483778 RPL19P84098 196 aaKnown RBP11.82□□□□□ -0.52
ATG4B-221ENST00000483778 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 MUC21A0A0G2JKD1 596 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 MUC21A0A140T8X8 626 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 A0A1B0GV50 99 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 UBE2D3P61077 147 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 UBE2D2P62837 147 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
ATG4B-221ENST00000483778 TOR2AQ5JU69 321 aa11.79□□□□□ -0.52
ATG4B-221ENST00000483778 LINC00528Q8N1L1 170 aa11.79□□□□□ -0.52
ATG4B-221ENST00000483778 OR10AG1Q8NH19 301 aa11.79□□□□□ -0.52
ATG4B-221ENST00000483778 SCO2A0A1W2PP80 73 aa11.78□□□□□ -0.52
ATG4B-221ENST00000483778 AKR1C3P42330 323 aa11.78□□□□□ -0.52
ATG4B-221ENST00000483778 ZFP82Q8N141 532 aa11.78□□□□□ -0.52
ATG4B-221ENST00000483778 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
ATG4B-221ENST00000483778 MBD3L1Q8WWY6 194 aa11.78□□□□□ -0.52
ATG4B-221ENST00000483778 URGCP-MRPS24S4R325 110 aa11.78□□□□□ -0.52
ATG4B-221ENST00000483778 TRBV7-3A0A075B6L6 115 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 RBFOX3A6NFN3 312 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 SSTP61278 116 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 ENHOQ6UWT2 76 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 KCNRGQ8N5I3 272 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 STOML3Q8TAV4 291 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 FAM213BQ8TBF2 198 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 MLST8Q9BVC4 326 aa11.77□□□□□ -0.53
ATG4B-221ENST00000483778 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
ATG4B-221ENST00000483778 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
ATG4B-221ENST00000483778 PRR27Q6MZM9 219 aa11.76□□□□□ -0.53
ATG4B-221ENST00000483778 Q8N976 141 aa11.76□□□□□ -0.53
ATG4B-221ENST00000483778 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
ATG4B-221ENST00000483778 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
ATG4B-221ENST00000483778 A0A087WX48 190 aa11.75□□□□□ -0.53
ATG4B-221ENST00000483778 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-221ENST00000483778 ATRAIDQ6UW56 229 aa11.75□□□□□ -0.53
ATG4B-221ENST00000483778 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
ATG4B-221ENST00000483778 TCEAL7Q9BRU2 100 aa11.75□□□□□ -0.53
ATG4B-221ENST00000483778 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
ATG4B-221ENST00000483778 TRBV6-8A0A0A6YYG3 113 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 TMEM262E9PQX1 116 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 RAB4BP61018 213 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 NTM-AS1Q6ZSK4 140 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 RMI2Q96E14 147 aa11.74□□□□□ -0.53
ATG4B-221ENST00000483778 SSBP4Q9BWG4 385 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-221ENST00000483778 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
ATG4B-221ENST00000483778 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
ATG4B-221ENST00000483778 CCL20P78556 96 aa11.73□□□□□ -0.53
ATG4B-221ENST00000483778 MPV17L2Q567V2 206 aa11.73□□□□□ -0.53
ATG4B-221ENST00000483778 J3QL48 77 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 SNAI2O43623 268 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 ZNF56Q15929 161 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 C15orf54Q8N8G6 183 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
ATG4B-221ENST00000483778 CIRBP-AS1Q8TBR5 109 aa11.71□□□□□ -0.53
ATG4B-221ENST00000483778 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
ATG4B-221ENST00000483778 DERL1Q9BUN8 251 aa11.71□□□□□ -0.53
ATG4B-221ENST00000483778 ZNF471Q9BX82 626 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-221ENST00000483778 S100A9P06702 114 aaKnown RBP11.7□□□□□ -0.54
ATG4B-221ENST00000483778 CXCL1P09341 107 aa11.7□□□□□ -0.54
ATG4B-221ENST00000483778 GZMBP10144 247 aa11.7□□□□□ -0.54
ATG4B-221ENST00000483778 ZNF345Q14585 488 aa11.7□□□□□ -0.54
ATG4B-221ENST00000483778 ELOBQ15370 118 aa11.7□□□□□ -0.54
ATG4B-221ENST00000483778 KRTAP29-1A8MX34 341 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-221ENST00000483778 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
ATG4B-221ENST00000483778 F5H697 171 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms