RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 IL17DQ8TAD2 202 aa5.95□□□□□ -1.46
COL4A5-205ENST00000483338 CREBBPQ92793 2442 aa5.95□□□□□ -1.46
COL4A5-205ENST00000483338 MED13Q9UHV7 2174 aa5.95□□□□□ -1.46
COL4A5-205ENST00000483338 PINLYPA6NC86 204 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 EPM2AB3EWF7 344 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 LST1O00453 97 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 SPRY3O43610 288 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 CHD8Q9HCK8 2581 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 PRIMA1Q86XR5 153 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 SIRPDQ9H106 197 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 ZNRD1Q9P1U0 126 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 DCHS1Q96JQ0 3298 aa5.94□□□□□ -1.46
COL4A5-205ENST00000483338 TRAV8-3A0A0A6YYJ7 113 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.93□□□□□ -1.46
COL4A5-205ENST00000483338 COX8CQ7Z4L0 72 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 IQCF6A8MYZ5 107 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 FAM216BQ8N7L0 139 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 Q8TAT8 98 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 IGKV2-40A0A087WW87 121 aaPredicted RBP5.93□□□□□ -1.46
COL4A5-205ENST00000483338 IGKV2D-40P01614 121 aaPredicted RBP5.93□□□□□ -1.46
COL4A5-205ENST00000483338 HCP5Q6MZN7 132 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 C2orf66Q6UXQ4 117 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 TIMM21Q9BVV7 248 aa5.93□□□□□ -1.46
COL4A5-205ENST00000483338 IGLV3-12A0A075B6K2 115 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 NBR2O15453 112 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 PSMB8P28062 276 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 SYNJ2BPP57105 145 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 NPC2P61916 151 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 DEFB109BQ30KR1 87 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 ORMDL2Q53FV1 153 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 FAM201AQ5SY85 155 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 Q6ZSV7 163 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 LYPD1Q8N2G4 141 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 C16orf92Q96LL3 132 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 ZNF292O60281 2723 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 PRSS2P07478 247 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 RAI1Q7Z5J4 1906 aaPredicted RBP5.92□□□□□ -1.46
COL4A5-205ENST00000483338 A0A1W2PNU3 283 aaPredicted RBP5.92□□□□□ -1.46
COL4A5-205ENST00000483338 C17orf58Q2M2W7 97 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 LINC00482Q8N8I6 264 aa5.92□□□□□ -1.46
COL4A5-205ENST00000483338 TRGV5A0A0B4J1U4 118 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 FAM223AQ8IWN6 122 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 ZNF491Q8N8L2 437 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 IMMP1LQ96LU5 166 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 PTPRQQ9UMZ3 2332 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 IGKV1D-17A0A075B6S4 117 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 M0R1B8 84 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 TSHBP01222 138 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 COX6CP09669 75 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 CGB3P0DN86 165 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 CGB7P0DN87 165 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 FP248Q71RG6 208 aaPredicted RBP5.91□□□□□ -1.46
COL4A5-205ENST00000483338 ZNRF1Q8ND25 227 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 TTTY12Q9BZ98 90 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 TRAV12-2A0A075B6T6 113 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 A0A087WVE0 104 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 I3L3M4 83 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 LGALS3P17931 250 aaKnown RBP5.91□□□□□ -1.46
COL4A5-205ENST00000483338 PLGLAQ15195 96 aa5.91□□□□□ -1.46
COL4A5-205ENST00000483338 BRK1Q8WUW1 75 aa5.9□□□□□ -1.46
COL4A5-205ENST00000483338 PRB3Q04118 309 aaPredicted RBP5.9□□□□□ -1.47
COL4A5-205ENST00000483338 MALRD1Q5VYJ5 2156 aa5.9□□□□□ -1.47
COL4A5-205ENST00000483338 TMEM200BQ69YZ2 307 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 TP53TG1Q9Y2A0 90 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 SPG11Q96JI7 2443 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 ANKRD11Q6UB99 2663 aaPredicted RBP5.89□□□□□ -1.47
COL4A5-205ENST00000483338 CIRBPQ14011 172 aaKnown RBP5.89□□□□□ -1.47
COL4A5-205ENST00000483338 TMEM167AQ8TBQ9 72 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 DKK4Q9UBT3 224 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 IGHV3OR16-10A0A075B7F0 116 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 IGKV3D-15A0A087WSY6 115 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 NDUFC2-KCTD14E9PQ53 114 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 H3BRN7 92 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 WT1P19544 449 aaPredicted RBP5.89□□□□□ -1.47
COL4A5-205ENST00000483338 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 DOPEY2Q9Y3R5 2298 aa5.89□□□□□ -1.47
COL4A5-205ENST00000483338 ARHGAP32A7KAX9 2087 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 FAM223BA6NKX1 122 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 DLX1P56177 255 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 TIRAPP58753 221 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
COL4A5-205ENST00000483338 Q0VFX4 171 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 PVRIGQ6DKI7 326 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.88□□□□□ -1.473e-7■■■■■ 52
COL4A5-205ENST00000483338 KALRNO60229 2985 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 NDUFC2O95298 119 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 DAZ2Q13117 558 aaKnown RBP5.88□□□□□ -1.47
COL4A5-205ENST00000483338 GFRALQ6UXV0 394 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
COL4A5-205ENST00000483338 TMEM243Q9BU79 118 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 DYNLRB1Q9NP97 96 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 DAZ1Q9NQZ3 744 aaKnown RBP5.88□□□□□ -1.47
COL4A5-205ENST00000483338 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
COL4A5-205ENST00000483338 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 RNF223E7ERA6 249 aa5.88□□□□□ -1.47
COL4A5-205ENST00000483338 FAM19A1Q7Z5A9 133 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms