RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 FUOMA2VDF0 154 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 EFCAB10A6NFE3 127 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 A6NIN4 97 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM212A6NML5 194 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 A8MUN3 132 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 A8MWP6 167 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 C9JCJ5 164 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 M0R129 80 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 MRPS14O60783 128 aaKnown RBP2.12□□□□□ -2.07
SHQ1-208ENST00000482785 ATG12O94817 140 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 CYB5AP00167 134 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 PFN1P07737 140 aaKnown RBP2.12□□□□□ -2.07
SHQ1-208ENST00000482785 CRYBA4P53673 196 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 TSPEAR-AS2P59090 65 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 HSPE1P61604 102 aaKnown RBP2.12□□□□□ -2.07
SHQ1-208ENST00000482785 GRK1Q15835 563 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 CCDC58Q4VC31 144 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 GLT8D1Q68CQ7 371 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 AMTNQ6UX39 209 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 IZUMO2Q6UXV1 221 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 HEPN1Q6WQI6 88 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 SLC25A26Q70HW3 274 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 STX19Q8N4C7 294 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 GDPD1Q8N9F7 314 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 ADAT3Q96EY9 351 aaPredicted RBP2.12□□□□□ -2.07
SHQ1-208ENST00000482785 BORCS8Q96FH0 119 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 ZNF714Q96N38 554 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM147Q9BVK8 224 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 C11orf1Q9H5F2 150 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 GNG8Q9UK08 70 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 TPRKBQ9Y3C4 175 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 LINC00312Q9Y6C7 94 aa2.12□□□□□ -2.07
SHQ1-208ENST00000482785 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 LRCOL1A6NCL2 159 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 OOSP1A8MZH6 123 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 J3QLW9 94 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 DEGS1O15121 323 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 CRYZL1O95825 349 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 OR2H2O95918 312 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 HTR1AP08908 422 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 PIPP12273 146 aaPredicted RBP2.11□□□□□ -2.07
SHQ1-208ENST00000482785 MIFP14174 115 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 GZMHP20718 246 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 SPRR2EP22531 72 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 CRHBPP24387 322 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 CRYBB3P26998 211 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 SPRR2BP35325 72 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 SPRR2AP35326 72 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 KISS1Q15726 138 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 RPL22L1Q6P5R6 122 aaKnown RBP2.11□□□□□ -2.07
SHQ1-208ENST00000482785 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 Q6ZS49 121 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 Q8N814 137 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 OR51A4Q8NGJ6 313 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 OR51T1Q8NGJ9 327 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 OR5AK2Q8NH90 309 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 UPK3BQ9BT76 320 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 MND1Q9BWT6 205 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 TTTY10Q9BZA0 68 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 RNASE7Q9H1E1 156 aaKnown RBP2.11□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM133Q9H2Q1 129 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 DUSP21Q9H596 190 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 UQCC1Q9NVA1 299 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 ERGIC3Q9Y282 383 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM56-RWDD3S4R434 201 aa2.11□□□□□ -2.07
SHQ1-208ENST00000482785 IGKV1D-37A0A075B6S9 117 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 TRAV3A0A0B4J244 114 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 ODAMA1E959 279 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 BUB1B-PAK6H3BSN5 160 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 SULT1A3P0DMM9 295 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 SULT1A4P0DMN0 295 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 GTF2A1P52655 376 aaPredicted RBP2.1□□□□□ -2.07
SHQ1-208ENST00000482785 EDDM3BP56851 147 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 RPS20P60866 119 aaKnown RBP2.1□□□□□ -2.07
SHQ1-208ENST00000482785 RPS11P62280 158 aaKnown RBP eCLIP2.1□□□□□ -2.07
SHQ1-208ENST00000482785 EIF4EBP1Q13541 118 aaPredicted RBP2.1□□□□□ -2.07
SHQ1-208ENST00000482785 EBI3Q14213 229 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 MPV17LQ2QL34 196 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 RASL11AQ6T310 242 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 SDIM1Q6ZPB5 146 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 DAND5Q8N907 189 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 OR10AC1Q8NH08 325 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 OR13C6PQ8NH95 151 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 MRPL30Q8TCC3 161 aaKnown RBP2.1□□□□□ -2.07
SHQ1-208ENST00000482785 MRPS24Q96EL2 167 aaKnown RBP2.1□□□□□ -2.07
SHQ1-208ENST00000482785 MGLLQ99685 303 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 CCDC90BQ9GZT6 254 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 CHST6Q9GZX3 395 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM222Q9H0R3 208 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM138Q9NPI0 162 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 BIN3Q9NQY0 253 aa2.1□□□□□ -2.07
SHQ1-208ENST00000482785 TRBV20OR9-2A0A075B6H5 130 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 A0A087WXM4 84 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 MEIKINA0A087WXM9 373 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 TRAV41A0A0B4J266 112 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 TMEM30CPA0ZSE6 113 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 IGSF23A1L1A6 192 aa2.09□□□□□ -2.07
SHQ1-208ENST00000482785 GRIFINA4D1Z8 144 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms