RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 UFSP1Q6NVU6 142 aa11.25□□□□□ -0.61
VAMP4-204ENST00000482519 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
VAMP4-204ENST00000482519 SFRP2Q96HF1 295 aa11.25□□□□□ -0.61
VAMP4-204ENST00000482519 MED9Q9NWA0 146 aa11.25□□□□□ -0.61
VAMP4-204ENST00000482519 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 MUC21A0A0G2JKD1 596 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 MUC21A0A140T8X8 626 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 PDE6DO43924 150 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 BCL2P10415 239 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 GNG4P50150 75 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 SPATA12Q7Z6I5 190 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 GTSF1LQ9H1H1 148 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 Q9UF83 564 aa11.24□□□□□ -0.61
VAMP4-204ENST00000482519 A0A1B0GVG6 124 aa11.23□□□□□ -0.61
VAMP4-204ENST00000482519 MED14OSP0DP75 135 aa11.23□□□□□ -0.61
VAMP4-204ENST00000482519 NFE4Q86UQ8 179 aa11.23□□□□□ -0.61
VAMP4-204ENST00000482519 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
VAMP4-204ENST00000482519 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
VAMP4-204ENST00000482519 VAX2Q9UIW0 290 aa11.23□□□□□ -0.61
VAMP4-204ENST00000482519 DNAH11Q96DT5 4516 aa11.23□□□□□ -0.61
VAMP4-204ENST00000482519 NKX2-5P52952 324 aaPredicted RBP11.22□□□□□ -0.61
VAMP4-204ENST00000482519 LELP1Q5T871 98 aa11.22□□□□□ -0.61
VAMP4-204ENST00000482519 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
VAMP4-204ENST00000482519 HERC2O95714 4834 aa11.22□□□□□ -0.61
VAMP4-204ENST00000482519 DYNC1H1Q14204 4646 aaKnown RBP11.21□□□□□ -0.61
VAMP4-204ENST00000482519 K7EP13 123 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 IGHV3-33P01772 117 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 SPANXN1Q5VSR9 72 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 TPPP3Q9BW30 176 aa11.21□□□□□ -0.61
VAMP4-204ENST00000482519 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
VAMP4-204ENST00000482519 CXCL1P09341 107 aa11.2□□□□□ -0.62
VAMP4-204ENST00000482519 GZMBP10144 247 aa11.2□□□□□ -0.62
VAMP4-204ENST00000482519 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
VAMP4-204ENST00000482519 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
VAMP4-204ENST00000482519 ZNF56Q15929 161 aa11.19□□□□□ -0.62
VAMP4-204ENST00000482519 LINC01556Q5JQF7 62 aa11.19□□□□□ -0.62
VAMP4-204ENST00000482519 F5H697 171 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 EREGO14944 169 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 SNAI2O43623 268 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 KRTAP10-2P60368 255 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 ERVFC1-1P60608 527 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 BLOC1S1P78537 153 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 SSBP4Q9BWG4 385 aaPredicted RBP11.18□□□□□ -0.62
VAMP4-204ENST00000482519 Q9HAA7 133 aa11.18□□□□□ -0.62
VAMP4-204ENST00000482519 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
VAMP4-204ENST00000482519 P01737 135 aa11.17□□□□□ -0.62
VAMP4-204ENST00000482519 RPS20P60866 119 aaKnown RBP11.17□□□□□ -0.62
VAMP4-204ENST00000482519 SMIM12Q96EX1 92 aa11.17□□□□□ -0.62
VAMP4-204ENST00000482519 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 RBFOX3A6NFN3 312 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 SMIM17P0DL12 118 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
VAMP4-204ENST00000482519 RAB4BP61018 213 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 RPL36AP83881 106 aaKnown RBP11.16□□□□□ -0.62
VAMP4-204ENST00000482519 Q8N3U1 123 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 FER1L6-AS1Q8NA97 138 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 RPL36ALQ969Q0 106 aaKnown RBP11.16□□□□□ -0.62
VAMP4-204ENST00000482519 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
VAMP4-204ENST00000482519 A0A087WWC5 75 aa11.15□□□□□ -0.62
VAMP4-204ENST00000482519 TRBV10-1A0A0K0K1A3 114 aa11.15□□□□□ -0.62
VAMP4-204ENST00000482519 IBA57-AS1B1ANH7 110 aa11.15□□□□□ -0.62
VAMP4-204ENST00000482519 PSCAO43653 123 aa11.15□□□□□ -0.62
VAMP4-204ENST00000482519 CEBPGP53567 150 aa11.15□□□□□ -0.62
VAMP4-204ENST00000482519 TRBV7-3A0A075B6L6 115 aa11.14□□□□□ -0.63
VAMP4-204ENST00000482519 XKRY2A2RUG3 117 aa11.14□□□□□ -0.63
VAMP4-204ENST00000482519 AP1S3Q96PC3 154 aa11.14□□□□□ -0.63
VAMP4-204ENST00000482519 A0A087WTM6 91 aa11.13□□□□□ -0.63
VAMP4-204ENST00000482519 IGLC6P0CF74 106 aa11.13□□□□□ -0.63
VAMP4-204ENST00000482519 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
VAMP4-204ENST00000482519 OCC1Q8TAD7 63 aa11.13□□□□□ -0.63
VAMP4-204ENST00000482519 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
VAMP4-204ENST00000482519 URGCP-MRPS24S4R325 110 aa11.13□□□□□ -0.63
VAMP4-204ENST00000482519 MGPP08493 103 aa11.12□□□□□ -0.63
VAMP4-204ENST00000482519 UBE2D3P61077 147 aa11.12□□□□□ -0.63
VAMP4-204ENST00000482519 UBE2D2P62837 147 aa11.12□□□□□ -0.63
VAMP4-204ENST00000482519 DAZ4Q86SG3 579 aaKnown RBP11.12□□□□□ -0.63
VAMP4-204ENST00000482519 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
VAMP4-204ENST00000482519 RNASE7Q9H1E1 156 aaKnown RBP11.12□□□□□ -0.63
VAMP4-204ENST00000482519 DAZ3Q9NR90 486 aaKnown RBP11.12□□□□□ -0.63
VAMP4-204ENST00000482519 CACNG7P62955 275 aa11.11□□□□□ -0.63
VAMP4-204ENST00000482519 TOR2AQ5JU69 321 aa11.11□□□□□ -0.63
VAMP4-204ENST00000482519 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
VAMP4-204ENST00000482519 NEXN-AS1Q8NBZ9 246 aa11.11□□□□□ -0.63
VAMP4-204ENST00000482519 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
VAMP4-204ENST00000482519 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
VAMP4-204ENST00000482519 RYR1P21817 5038 aa11.1□□□□□ -0.63
VAMP4-204ENST00000482519 F2Z2F3 143 aa11.1□□□□□ -0.63
VAMP4-204ENST00000482519 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
VAMP4-204ENST00000482519 K7EN84 100 aa11.1□□□□□ -0.63
VAMP4-204ENST00000482519 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
VAMP4-204ENST00000482519 RPP21Q9H633 154 aaKnown RBP11.1□□□□□ -0.63
VAMP4-204ENST00000482519 KIF25-AS1Q9Y6Z4 181 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms