RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 CRIP1P50238 77 aa12.48□□□□□ -0.41
TMEM139-208ENST00000482420 Q5BKY6 102 aa12.48□□□□□ -0.41
TMEM139-208ENST00000482420 Q8N976 141 aa12.48□□□□□ -0.41
TMEM139-208ENST00000482420 UBE2WQ96B02 151 aa12.48□□□□□ -0.41
TMEM139-208ENST00000482420 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
TMEM139-208ENST00000482420 A6NHS1 94 aa12.47□□□□□ -0.41
TMEM139-208ENST00000482420 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
TMEM139-208ENST00000482420 M0R381 172 aa12.47□□□□□ -0.41
TMEM139-208ENST00000482420 SH2D1AO60880 128 aa12.47□□□□□ -0.41
TMEM139-208ENST00000482420 RPL7L1Q6DKI1 246 aaKnown RBP12.47□□□□□ -0.41
TMEM139-208ENST00000482420 PHLDA3Q9Y5J5 127 aa12.47□□□□□ -0.41
TMEM139-208ENST00000482420 A0A087WX48 190 aa12.46□□□□□ -0.41
TMEM139-208ENST00000482420 MED28Q9H204 178 aa12.46□□□□□ -0.41
TMEM139-208ENST00000482420 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
TMEM139-208ENST00000482420 RNF222A6NCQ9 220 aa12.45□□□□□ -0.42
TMEM139-208ENST00000482420 FAM74A7A6NL05 159 aa12.45□□□□□ -0.42
TMEM139-208ENST00000482420 SEC11BP0C7V7 166 aa12.45□□□□□ -0.42
TMEM139-208ENST00000482420 KCNIP4Q6PIL6 250 aa12.45□□□□□ -0.42
TMEM139-208ENST00000482420 CHAC1Q9BUX1 264 aa12.45□□□□□ -0.42
TMEM139-208ENST00000482420 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
TMEM139-208ENST00000482420 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
TMEM139-208ENST00000482420 INO80EQ8NBZ0 244 aaPredicted RBP12.44□□□□□ -0.42
TMEM139-208ENST00000482420 CIRBP-AS1Q8TBR5 109 aa12.44□□□□□ -0.42
TMEM139-208ENST00000482420 HIST1H2BAQ96A08 127 aa12.44□□□□□ -0.42
TMEM139-208ENST00000482420 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
TMEM139-208ENST00000482420 BORCS7-ASMTA0A0B4J1R7 106 aa12.43□□□□□ -0.42
TMEM139-208ENST00000482420 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
TMEM139-208ENST00000482420 FXYD6-FXYD2A0A087WZ82 144 aa12.42□□□□□ -0.42
TMEM139-208ENST00000482420 UBE2G1P62253 170 aa12.42□□□□□ -0.42
TMEM139-208ENST00000482420 RPL36AP83881 106 aaKnown RBP12.42□□□□□ -0.42
TMEM139-208ENST00000482420 ELOBQ15370 118 aa12.42□□□□□ -0.42
TMEM139-208ENST00000482420 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
TMEM139-208ENST00000482420 RPL36ALQ969Q0 106 aaKnown RBP12.42□□□□□ -0.42
TMEM139-208ENST00000482420 ZFP30Q9Y2G7 519 aa12.42□□□□□ -0.42
TMEM139-208ENST00000482420 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
TMEM139-208ENST00000482420 KRTAP10-4P60372 401 aaPredicted RBP12.41□□□□□ -0.42
TMEM139-208ENST00000482420 AKR1C8PQ5T2L2 129 aa12.41□□□□□ -0.42
TMEM139-208ENST00000482420 FMC1Q96HJ9 113 aa12.41□□□□□ -0.42
TMEM139-208ENST00000482420 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
TMEM139-208ENST00000482420 NKX6-2Q9C056 277 aaPredicted RBP12.41□□□□□ -0.42
TMEM139-208ENST00000482420 TRBV7-3A0A075B6L6 115 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 TRBV10-1A0A0K0K1A3 114 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 UBE2D3P61077 147 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 UBE2D2P62837 147 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 ZNF674Q2M3X9 581 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 C1orf43Q9BWL3 253 aa12.4□□□□□ -0.42
TMEM139-208ENST00000482420 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
TMEM139-208ENST00000482420 GIPP09681 153 aaPredicted RBP12.39□□□□□ -0.43
TMEM139-208ENST00000482420 Q0VG73 95 aa12.39□□□□□ -0.43
TMEM139-208ENST00000482420 ATRAIDQ6UW56 229 aa12.39□□□□□ -0.43
TMEM139-208ENST00000482420 COX8CQ7Z4L0 72 aa12.39□□□□□ -0.43
TMEM139-208ENST00000482420 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
TMEM139-208ENST00000482420 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
TMEM139-208ENST00000482420 LTAP01374 205 aa12.38□□□□□ -0.43
TMEM139-208ENST00000482420 IGLV2-8P01709 118 aa12.38□□□□□ -0.43
TMEM139-208ENST00000482420 CRPP02741 224 aa12.38□□□□□ -0.43
TMEM139-208ENST00000482420 CST9LP1Q5W188 147 aa12.38□□□□□ -0.43
TMEM139-208ENST00000482420 ENHOQ6UWT2 76 aa12.38□□□□□ -0.43
TMEM139-208ENST00000482420 LRP1Q07954 4544 aaKnown RBP12.37□□□□□ -0.43
TMEM139-208ENST00000482420 PTTG1O95997 202 aa12.37□□□□□ -0.43
TMEM139-208ENST00000482420 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
TMEM139-208ENST00000482420 AKR1C3P42330 323 aa12.37□□□□□ -0.43
TMEM139-208ENST00000482420 ZNF56Q15929 161 aa12.37□□□□□ -0.43
TMEM139-208ENST00000482420 MPV17L2Q567V2 206 aa12.37□□□□□ -0.43
TMEM139-208ENST00000482420 TRBV6-8A0A0A6YYG3 113 aa12.36□□□□□ -0.43
TMEM139-208ENST00000482420 ANGP03950 147 aaKnown RBP12.36□□□□□ -0.43
TMEM139-208ENST00000482420 RPL19P84098 196 aaKnown RBP12.36□□□□□ -0.43
TMEM139-208ENST00000482420 C14orf177Q52M58 125 aa12.36□□□□□ -0.43
TMEM139-208ENST00000482420 SERTAD4-AS1Q5TG53 156 aa12.36□□□□□ -0.43
TMEM139-208ENST00000482420 NEXN-AS1Q8NBZ9 246 aa12.35□□□□□ -0.43
TMEM139-208ENST00000482420 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
TMEM139-208ENST00000482420 OR10AG1Q8NH19 301 aa12.35□□□□□ -0.43
TMEM139-208ENST00000482420 STOML3Q8TAV4 291 aa12.35□□□□□ -0.43
TMEM139-208ENST00000482420 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
TMEM139-208ENST00000482420 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
TMEM139-208ENST00000482420 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
TMEM139-208ENST00000482420 RAB4BP61018 213 aa12.34□□□□□ -0.43
TMEM139-208ENST00000482420 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
TMEM139-208ENST00000482420 TRBV6-1A0A0K0K1D8 114 aa12.33□□□□□ -0.44
TMEM139-208ENST00000482420 OXTP01178 125 aa12.33□□□□□ -0.44
TMEM139-208ENST00000482420 FHITP49789 147 aa12.33□□□□□ -0.44
TMEM139-208ENST00000482420 SSTP61278 116 aa12.33□□□□□ -0.44
TMEM139-208ENST00000482420 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
TMEM139-208ENST00000482420 ARPC5O15511 151 aa12.32□□□□□ -0.44
TMEM139-208ENST00000482420 RPL37AP61513 92 aaKnown RBP12.32□□□□□ -0.44
TMEM139-208ENST00000482420 TCEAL7Q9BRU2 100 aa12.32□□□□□ -0.44
TMEM139-208ENST00000482420 A0A1B0GV50 99 aa12.31□□□□□ -0.44
TMEM139-208ENST00000482420 F5H697 171 aa12.31□□□□□ -0.44
TMEM139-208ENST00000482420 PAGE4O60829 102 aa12.31□□□□□ -0.44
TMEM139-208ENST00000482420 ZNF471Q9BX82 626 aaPredicted RBP12.31□□□□□ -0.44
TMEM139-208ENST00000482420 PRSS1P07477 247 aa12.3□□□□□ -0.44
TMEM139-208ENST00000482420 PRR27Q6MZM9 219 aa12.3□□□□□ -0.44
TMEM139-208ENST00000482420 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.3□□□□□ -0.44
TMEM139-208ENST00000482420 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
TMEM139-208ENST00000482420 SCO2A0A1W2PP80 73 aa12.29□□□□□ -0.44
TMEM139-208ENST00000482420 G3V3Q6 166 aa12.29□□□□□ -0.44
TMEM139-208ENST00000482420 HNRNPA3P51991 378 aaKnown RBP12.29□□□□□ -0.44
TMEM139-208ENST00000482420 MIAQ16674 131 aa12.29□□□□□ -0.44
TMEM139-208ENST00000482420 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms