RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PCSK5Q92824 1860 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 UNQ9165/PRO28630Q6UXU0 137 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 MBD6Q96DN6 1003 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.72□□□□□ -1.01
SMPD4-218ENST00000482171 SLURP1P55000 103 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 SPXQ9BT56 116 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 TRBV20-1A0A075B6N2 111 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 VCYO14598 125 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 Q8N976 141 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 ZNF48Q96MX3 618 aaPredicted RBP8.72□□□□□ -1.01
SMPD4-218ENST00000482171 SMIM2Q9BVW6 85 aa8.72□□□□□ -1.01
SMPD4-218ENST00000482171 TRAV26-1A0A087WT03 109 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 C19orf71A6NCJ1 209 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 ELANEP08246 267 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 ATXN8Q156A1 80 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 TAL2Q16559 108 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 DSPP15924 2871 aaKnown RBP8.71□□□□□ -1.01
SMPD4-218ENST00000482171 A0A087WX48 190 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.01
SMPD4-218ENST00000482171 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
SMPD4-218ENST00000482171 IGHV3-16A0A0C4DH30 117 aa8.71□□□□□ -1.02
SMPD4-218ENST00000482171 GNRH2O43555 120 aa8.71□□□□□ -1.02
SMPD4-218ENST00000482171 FGF6P10767 208 aa8.71□□□□□ -1.02
SMPD4-218ENST00000482171 HECTD1Q9ULT8 2610 aa8.7□□□□□ -1.02
SMPD4-218ENST00000482171 ZNF843Q8N446 348 aa8.7□□□□□ -1.02
SMPD4-218ENST00000482171 PRO1854Q9UHT4 67 aa8.7□□□□□ -1.02
SMPD4-218ENST00000482171 WI2-2373I1.2A0A1W2PRP0 233 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 LY6LH3BQJ8 138 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 SLC25A20O43772 301 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 HIST2H2BDQ6DRA6 164 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 CFHR3Q02985 330 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 PRSS29PA6NIE9 313 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 IGHG2P01859 326 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 NTN5Q8WTR8 489 aaPredicted RBP8.69□□□□□ -1.02
SMPD4-218ENST00000482171 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 FRYLO94915 3013 aa8.69□□□□□ -1.02
SMPD4-218ENST00000482171 TRBV7-9A0A0J9YWB2 115 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 CRYGBP07316 175 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 ZNF415Q09FC8 603 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 WFDC11Q8NEX6 87 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 PTH2Q96A98 100 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 CCDC140Q96MF4 163 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 INSP01308 110 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
SMPD4-218ENST00000482171 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 TNRC6BQ9UPQ9 1833 aaKnown RBP8.68□□□□□ -1.02
SMPD4-218ENST00000482171 IGHV4OR15-8A0A075B7B6 117 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 A0A087WW49 117 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 PMVKQ15126 192 aa8.68□□□□□ -1.02
SMPD4-218ENST00000482171 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
SMPD4-218ENST00000482171 LGALS1P09382 135 aaKnown RBP8.67□□□□□ -1.02
SMPD4-218ENST00000482171 CRYBA4P53673 196 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 ODF1Q14990 250 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 H3BUA1 57 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 REV3LO60673 3130 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 C10orf99Q6UWK7 81 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 ZNF625Q96I27 306 aaPredicted RBP8.67□□□□□ -1.02
SMPD4-218ENST00000482171 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
SMPD4-218ENST00000482171 A6NDX4 124 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 SDHAF1A6NFY7 115 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 H3BMM0 161 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 TNFRSF13BO14836 293 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-218ENST00000482171 UBE2WQ96B02 151 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 IFITM1P13164 125 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE5Q13069 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE6Q13070 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 TMEM101Q96IK0 257 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 ADARB2-AS1A8MUL3 147 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 VWC2LB2RUY7 222 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE7O76087 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE12FP0CL80 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE12GP0CL81 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE12IP0CL82 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 GAGE4Q13068 117 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 C16orf54Q6UWD8 224 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 C2orf91Q6ZV80 131 aa8.66□□□□□ -1.02
SMPD4-218ENST00000482171 FOXI1Q12951 378 aa8.65□□□□□ -1.02
SMPD4-218ENST00000482171 J3QQQ9 107 aa8.65□□□□□ -1.02
SMPD4-218ENST00000482171 PTPRBP23467 1997 aa8.65□□□□□ -1.03
SMPD4-218ENST00000482171 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 CCL24O00175 119 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 FSTL3O95633 263 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 IGHV3-38A0A0C4DH36 116 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
SMPD4-218ENST00000482171 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
SMPD4-218ENST00000482171 AKAP13Q12802 2813 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms