RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 FAM27BQ5VT28 67 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 LYZL1Q6UWQ5 148 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 DPPA3Q6W0C5 159 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 TSKUQ8WUA8 353 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 S100A13Q99584 98 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 TMEM242Q9NWH2 141 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 LY96Q9Y6Y9 160 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 C10orf71Q711Q0 1435 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 EPRSP07814 1512 aaKnown RBP1.79□□□□□ -2.12
SF3B1-210ENST00000482158 KIF14Q15058 1648 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 MAP3K4Q9Y6R4 1608 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 LAMB4A4D0S4 1761 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 KDM3BQ7LBC6 1761 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 BTAF1O14981 1849 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 NINQ8N4C6 2090 aa1.79□□□□□ -2.12
SF3B1-210ENST00000482158 MGAMO43451 1857 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 MAP2P11137 1827 aaKnown RBP1.78□□□□□ -2.12
SF3B1-210ENST00000482158 ARFGEF2Q9Y6D5 1785 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 ABCA8O94911 1581 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 NLRP1Q9C000 1473 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 TRAV14DV4A0A0A6YYC5 116 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 TRAV3A0A0B4J244 114 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 TRBV10-2A0A0K0K1G8 114 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 hDV103S1A0JD37 113 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 IGLC7A0M8Q6 106 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 GNGT2O14610 69 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 UBL3O95164 117 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 SFT2D2O95562 160 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 IL5P05113 134 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 SNCAP37840 140 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 ASIPP42127 132 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 ATP5EP56381 51 aaPredicted RBP1.78□□□□□ -2.12
SF3B1-210ENST00000482158 ROMO1P60602 79 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 ESRGQ1W209 222 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 C12orf73Q69YU5 71 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 Q6ZQT0 140 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 LINC00299Q6ZSB3 139 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 C5orf38Q86SI9 138 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 SPTSSAQ969W0 71 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 UQCR10Q9UDW1 63 aa1.78□□□□□ -2.12
SF3B1-210ENST00000482158 PDCD11Q14690 1871 aaKnown RBP1.77□□□□□ -2.13
SF3B1-210ENST00000482158 RGPD8O14715 1765 aaPredicted RBP1.77□□□□□ -2.13
SF3B1-210ENST00000482158 RGPD2P0DJD1 1756 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 RGPD5Q99666 1765 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 CLTCQ00610 1675 aaKnown RBP1.77□□□□□ -2.13
SF3B1-210ENST00000482158 PTPN23Q9H3S7 1636 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 PRDM15P57071 1507 aaPredicted RBP1.77□□□□□ -2.13
SF3B1-210ENST00000482158 UGGT2Q9NYU1 1516 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 SHANK2Q9UPX8 1470 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 DAPK1P53355 1430 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 IGHV1-24A0A0C4DH33 117 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 UBE2L5PA0A1B0GUS4 154 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 C17orf112F2Z3M2 114 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 F8W1H4 67 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 H7C2G1 150 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 PDCD5O14737 125 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 CYB5AP00167 134 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 FXYD2P54710 66 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 UBE2L3P68036 154 aaKnown RBP1.77□□□□□ -2.13
SF3B1-210ENST00000482158 NNATQ16517 81 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 FAM19A2Q8N3H0 131 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 LINC00301Q8NCQ3 95 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 PMCHL2Q9BQD1 86 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 C20orf78Q9BR46 151 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 SLC50A1Q9BRV3 221 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 CST11Q9H112 138 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 NHP2Q9NX24 153 aaKnown RBP1.77□□□□□ -2.13
SF3B1-210ENST00000482158 MICAL3Q7RTP6 2002 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 LAMB2P55268 1798 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 LRP5O75197 1615 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 MYO3AQ8NEV4 1616 aa1.77□□□□□ -2.13
SF3B1-210ENST00000482158 MED12LQ86YW9 2145 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 EEA1Q15075 1411 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 IGKV1D-42A0A075B6H8 117 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 TRGV2A0A075B6R0 118 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 IGHV1-18A0A0C4DH31 117 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 TRBV7-7A0A0K0K1E9 115 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 hADV29S1A0JD25 119 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 NUPR1O60356 82 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 GYPAP02724 150 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 PIRTP0C851 137 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 CBLN1P23435 193 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 SSR2P43308 183 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 DEFA5Q01523 94 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 C1orf134Q5TEV5 83 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 LINC00269Q8N2A0 174 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 C15orf53Q8NAA6 179 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 TSLPQ969D9 159 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 Q96M85 177 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 SMCO4Q9NRQ5 59 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 TIMM9Q9Y5J7 89 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 ITSN1Q15811 1721 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 TARBP1Q13395 1621 aaKnown RBP1.76□□□□□ -2.13
SF3B1-210ENST00000482158 RP1L1Q8IWN7 2480 aaPredicted RBP1.76□□□□□ -2.13
SF3B1-210ENST00000482158 CFAP74Q9C0B2 1584 aa1.76□□□□□ -2.13
SF3B1-210ENST00000482158 PTPRMP28827 1452 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
SF3B1-210ENST00000482158 IBA57-AS1B1ANH7 110 aa1.75□□□□□ -2.13
SF3B1-210ENST00000482158 C5orf67F2Z3F1 127 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms