RNA–Protein interactions for RNA: ENST00000481958.1

APOBEC3G-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

TSL 2

Gene APOBEC3G, Length 2,337 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-205ENST00000481958 KHDC1LQ5JSQ8 128 aa11.93□□□□□ -0.5
APOBEC3G-205ENST00000481958 HIGD1AQ9Y241 93 aa11.93□□□□□ -0.5
APOBEC3G-205ENST00000481958 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 TRBV6-1A0A0K0K1D8 114 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 A0A1W2PRX2 142 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 LINC01619G3V211 115 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 GAGE12JA6NER3 117 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 GAGE7O76087 117 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 GAGE4Q13068 117 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 LYRM7Q5U5X0 104 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 CFAP126Q5VTH2 177 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 ORMDL3Q8N138 153 aa11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 DLX4Q92988 240 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3G-205ENST00000481958 STAB1Q9NY15 2570 aa11.91□□□□□ -0.5
APOBEC3G-205ENST00000481958 TCRAP04437 139 aa11.91□□□□□ -0.5
APOBEC3G-205ENST00000481958 H3BRN7 92 aa11.91□□□□□ -0.5
APOBEC3G-205ENST00000481958 H3BTX0 84 aa11.91□□□□□ -0.5
APOBEC3G-205ENST00000481958 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
APOBEC3G-205ENST00000481958 SHANK2-AS3Q9BTD1 123 aa11.91□□□□□ -0.5
APOBEC3G-205ENST00000481958 ADARB2-AS1A8MUL3 147 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 IGKCP01834 107 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 AMTNQ6UX39 209 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 MRPS12O15235 138 aaKnown RBP11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 ARMS2P0C7Q2 107 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 GP9P14770 177 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 SLURP1P55000 103 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 C4orf3Q8WVX3 66 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
APOBEC3G-205ENST00000481958 NDUFA4O00483 81 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 ATP5LO75964 103 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 HOXD3P31249 432 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 Q86TA4 180 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 TMEM158Q8WZ71 300 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 DKK2Q9UBU2 259 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 TWIST1Q15672 202 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 TEN1Q86WV5 123 aa11.88□□□□□ -0.51
APOBEC3G-205ENST00000481958 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 BUB3O43684 328 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 FAM104BQ5XKR9 115 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 SMIM20Q8N5G0 67 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 D6R8Y8 96 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 J3KRW8 73 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 RHODO00212 210 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 DPM2O94777 84 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 ZNF688P0C7X2 276 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 ODF1Q14990 250 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 KRTAP24-1Q3LI83 254 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 HIST1H4GQ99525 98 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 U3KQE9 123 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 SORL1Q92673 2214 aa11.87□□□□□ -0.51
APOBEC3G-205ENST00000481958 IGKV2D-26A0A0A0MRZ7 120 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 ASIPP42127 132 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 CITED1Q99966 193 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 OTORQ9NRC9 128 aa11.86□□□□□ -0.51
APOBEC3G-205ENST00000481958 TMEM213A2RRL7 107 aa11.85□□□□□ -0.51
APOBEC3G-205ENST00000481958 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
APOBEC3G-205ENST00000481958 FABP5P3A8MUU1 101 aa11.85□□□□□ -0.51
APOBEC3G-205ENST00000481958 Q6Q795 121 aa11.85□□□□□ -0.51
APOBEC3G-205ENST00000481958 Q9H3A6 140 aa11.85□□□□□ -0.51
APOBEC3G-205ENST00000481958 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
APOBEC3G-205ENST00000481958 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
APOBEC3G-205ENST00000481958 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
APOBEC3G-205ENST00000481958 GAGE2EQ4V326 116 aa11.84□□□□□ -0.51
APOBEC3G-205ENST00000481958 METTL26Q96S19 204 aa11.84□□□□□ -0.51
APOBEC3G-205ENST00000481958 GAGE2DQ9UEU5 116 aa11.84□□□□□ -0.51
APOBEC3G-205ENST00000481958 NHLRC4P0CG21 123 aaPredicted RBP11.83□□□□□ -0.51
APOBEC3G-205ENST00000481958 FCER1GP30273 86 aa11.83□□□□□ -0.51
APOBEC3G-205ENST00000481958 NDUFV3P56181 108 aaKnown RBP11.83□□□□□ -0.51
APOBEC3G-205ENST00000481958 PRSS1P07477 247 aa11.83□□□□□ -0.52
APOBEC3G-205ENST00000481958 FHL3Q13643 280 aa11.83□□□□□ -0.52
APOBEC3G-205ENST00000481958 DAZ1Q9NQZ3 744 aaKnown RBP11.83□□□□□ -0.52
APOBEC3G-205ENST00000481958 NOTCH3Q9UM47 2321 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 TRBV20-1A0A075B6N2 111 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 SMCPP49901 116 aaPredicted RBP11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 TTC32Q5I0X7 151 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 CCL24O00175 119 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 TMEM14CQ9P0S9 112 aa11.82□□□□□ -0.52
APOBEC3G-205ENST00000481958 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
APOBEC3G-205ENST00000481958 IGHV7-4-1A0A0J9YVY3 117 aa11.81□□□□□ -0.52
APOBEC3G-205ENST00000481958 IFITM1P13164 125 aa11.81□□□□□ -0.52
APOBEC3G-205ENST00000481958 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
APOBEC3G-205ENST00000481958 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms