RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 NINQ8N4C6 2090 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 CDK13Q14004 1512 aaKnown RBP-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 MUC17Q685J3 4493 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 PRRC2CQ9Y520 2896 aaKnown RBP-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 DNAH6Q9C0G6 4158 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 CHD8Q9HCK8 2581 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 A0A1B0GW64 132 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 APODP05090 189 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 HIST1H1BP16401 226 aaKnown RBP-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 OR8B8Q15620 311 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 TMEM91Q6ZNR0 172 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 Q6ZRX8 168 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 C4orf33Q8N1A6 199 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 TAS2R8Q9NYW2 309 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 PKDREJQ9NTG1 2253 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 ATRQ13535 2644 aa-0.52□□□□□ -2.49
KDM1A-204ENST00000481879 CNOT1A5YKK6 2376 aaKnown RBP-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 MED13LQ71F56 2210 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 ROCK1Q13464 1354 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 MED23Q9ULK4 1368 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 TRBV7-1A0A0A6YYK4 115 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 CCL3L1P16619 93 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 NPC2P61916 151 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 SSBP1Q04837 148 aaKnown RBP-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 TMEM244Q5VVB8 128 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 CYP2G1PQ6ZSU1 146 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 SNX29P2Q8IUI4 249 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 TMEM242Q9NWH2 141 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 CALML5Q9NZT1 146 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 NUP210LQ5VU65 1888 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 PIK3C2AO00443 1686 aa-0.53□□□□□ -2.49
KDM1A-204ENST00000481879 TACC2O95359 2948 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 SPTBN2O15020 2390 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 FAT3Q8TDW7 4589 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 F5P12259 2224 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 PAEPP09466 180 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 ACYP2P14621 99 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 RBM3P98179 157 aaKnown RBP-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 SAMD13Q5VXD3 122 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 SSBP3-AS1Q7Z2R9 100 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 C20orf197Q8N268 126 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 DYNLRB2Q8TF09 96 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 SLC35B3Q9H1N7 401 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 SVEP1Q4LDE5 3571 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 NBEAL2Q6ZNJ1 2754 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 TANC2Q9HCD6 1990 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 CSPG4Q6UVK1 2322 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 COL6A5A8TX70 2615 aa-0.54□□□□□ -2.5
KDM1A-204ENST00000481879 NIPBLQ6KC79 2804 aaeCLIP-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 DNAH2Q9P225 4427 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 VPS13DQ5THJ4 4388 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 USP54Q70EL1 1684 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 CHD9Q3L8U1 2897 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 TRGV1A0A0A0MS02 117 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 ZNF815PA8K554 130 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 FABP1P07148 127 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 COX7B2Q8TF08 81 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 CYP4F30PQ9H0H9 118 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 SMPXQ9UHP9 88 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 NOP16Q9Y3C1 178 aaKnown RBP-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 V9GYV3 84 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 SYNMO15061 1565 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 TRPM7Q96QT4 1865 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 PKHD1L1Q86WI1 4243 aa-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 TNRC18O15417 2968 aaPredicted RBP-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 PLECQ15149 4684 aaKnown RBP-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.55□□□□□ -2.5
KDM1A-204ENST00000481879 CUBNO60494 3623 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 TEX15Q9BXT5 2789 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 LRP5O75197 1615 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 PI4KAP42356 2102 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 DNAH3Q8TD57 4116 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 TRAV2A0A0B4J234 112 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 A0A1B0GV72 72 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 SMIM24O75264 130 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 DPM2O94777 84 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 HLA-DRB4P13762 266 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 GCHFRP30047 84 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 RPS28P62857 69 aaKnown RBP-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 CLLU1Q5K131 121 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 TOMM20LQ6UXN7 152 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 NDUFA11Q86Y39 141 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 HLA-DRB4X5D2U9 266 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 SPTBN1Q01082 2364 aaKnown RBP-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 ARHGAP31Q2M1Z3 1444 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 ANK1P16157 1881 aa-0.56□□□□□ -2.5
KDM1A-204ENST00000481879 TMEM14DPA8MWL7 114 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 S100GP29377 79 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 SPRR2BP35325 72 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 INSL4Q14641 139 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 FAM74A4Q5TZK3 123 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 SLC48A1Q6P1K1 146 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 ATP11AUNQ6ZP68 121 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 UBE2DNLQ8IWF7 75 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 OR8I2Q8N0Y5 310 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 ATP6V0E2Q8NHE4 81 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 BANF2Q9H503 90 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 ERG28Q9UKR5 140 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 RREB1Q92766 1687 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 ANKRD11Q6UB99 2663 aaPredicted RBP-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms