RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 OCIAD2Q56VL3 154 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 A0A087WX48 190 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 ZNF688P0C7X2 276 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 OR11H1Q8NG94 326 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 MYO9AB2RTY4 2548 aa13.72□□□□□ -0.21
MRPL28-209ENST00000481453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-209ENST00000481453 C14orf178Q8N769 122 aaPredicted RBP13.71□□□□□ -0.21
MRPL28-209ENST00000481453 CHAC1Q9BUX1 264 aa13.71□□□□□ -0.21
MRPL28-209ENST00000481453 DPH3P1Q9H4G8 78 aa13.71□□□□□ -0.21
MRPL28-209ENST00000481453 UFSP1Q6NVU6 142 aa13.71□□□□□ -0.22
MRPL28-209ENST00000481453 TRBV25-1A0A075B6N4 114 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
MRPL28-209ENST00000481453 C21orf62-AS1Q17RA5 79 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 ORMDL2Q53FV1 153 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 KHDC1LQ5JSQ8 128 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 RASL10AQ92737 203 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 CUBNO60494 3623 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 FASNP49327 2511 aaKnown RBP13.7□□□□□ -0.22
MRPL28-209ENST00000481453 KLLNB2CW77 178 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 SMIM13P0DJ93 91 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 KLHL30-AS1Q8NEE0 82 aa13.7□□□□□ -0.22
MRPL28-209ENST00000481453 K7EP34 96 aa13.69□□□□□ -0.22
MRPL28-209ENST00000481453 MGPP08493 103 aa13.69□□□□□ -0.22
MRPL28-209ENST00000481453 PLNP26678 52 aa13.69□□□□□ -0.22
MRPL28-209ENST00000481453 FXYD2P54710 66 aa13.69□□□□□ -0.22
MRPL28-209ENST00000481453 RPL39LQ96EH5 51 aaKnown RBP13.69□□□□□ -0.22
MRPL28-209ENST00000481453 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
MRPL28-209ENST00000481453 GNRH2O43555 120 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 RNASE1P07998 156 aaKnown RBP13.68□□□□□ -0.22
MRPL28-209ENST00000481453 HLA-DRB4P13762 266 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 SNRPD3P62318 126 aaKnown RBP13.68□□□□□ -0.22
MRPL28-209ENST00000481453 SMR3AQ99954 134 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 HLA-DRB4X5D2U9 266 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 A0A0J9YX75 114 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 MED14OSP0DP75 135 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 SCGB3A1Q96QR1 104 aa13.68□□□□□ -0.22
MRPL28-209ENST00000481453 A0A1W2PPM0 123 aa13.67□□□□□ -0.22
MRPL28-209ENST00000481453 DLX4Q92988 240 aaPredicted RBP13.67□□□□□ -0.22
MRPL28-209ENST00000481453 H7C1H1 209 aa13.67□□□□□ -0.22
MRPL28-209ENST00000481453 WFDC12Q8WWY7 111 aa13.67□□□□□ -0.22
MRPL28-209ENST00000481453 TOMM6Q96B49 74 aa13.67□□□□□ -0.22
MRPL28-209ENST00000481453 TRAV12-1A0A0B4J245 112 aa13.66□□□□□ -0.22
MRPL28-209ENST00000481453 RNASE3P12724 160 aaKnown RBP13.66□□□□□ -0.22
MRPL28-209ENST00000481453 F8VRH5 84 aa13.66□□□□□ -0.22
MRPL28-209ENST00000481453 MAPKAPK5-AS1Q8N8E1 139 aa13.66□□□□□ -0.22
MRPL28-209ENST00000481453 ODF3Q96PU9 254 aa13.66□□□□□ -0.22
MRPL28-209ENST00000481453 CD28P10747 220 aa13.65□□□□□ -0.22
MRPL28-209ENST00000481453 VPS25Q9BRG1 176 aa13.65□□□□□ -0.22
MRPL28-209ENST00000481453 C16orf95Q9H693 158 aa13.65□□□□□ -0.22
MRPL28-209ENST00000481453 PEMTQ9UBM1 199 aa13.65□□□□□ -0.22
MRPL28-209ENST00000481453 SPCS1Q9Y6A9 102 aa13.65□□□□□ -0.22
MRPL28-209ENST00000481453 HECTD1Q9ULT8 2610 aa13.65□□□□□ -0.22
MRPL28-209ENST00000481453 K7EMI3 77 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 FABP2P12104 132 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 CEND1Q8N111 149 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 C11orf44Q8N8P7 122 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 LINC01006Q8NI28 216 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 RAX2Q96IS3 184 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 CHTOPQ9Y3Y2 248 aaKnown RBP13.64□□□□□ -0.23
MRPL28-209ENST00000481453 K7ERU9 68 aa13.64□□□□□ -0.23
MRPL28-209ENST00000481453 TM2D2Q9BX73 214 aa13.63□□□□□ -0.23
MRPL28-209ENST00000481453 K7ERJ3 54 aa13.63□□□□□ -0.23
MRPL28-209ENST00000481453 PPP1R17O96001 155 aa13.63□□□□□ -0.23
MRPL28-209ENST00000481453 HILS1P60008 231 aa13.63□□□□□ -0.23
MRPL28-209ENST00000481453 FHL3Q13643 280 aa13.63□□□□□ -0.23
MRPL28-209ENST00000481453 C2orf66Q6UXQ4 117 aa13.63□□□□□ -0.23
MRPL28-209ENST00000481453 NHP2Q9NX24 153 aaKnown RBP13.63□□□□□ -0.23
MRPL28-209ENST00000481453 TMEM61Q8N0U2 210 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 NEXN-AS1Q8NBZ9 246 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 OR5A1Q8NGJ0 315 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 IGKV3-20P01619 116 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 SCGB2A2Q13296 93 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 FAM159AQ6UWV7 190 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 FOXI2Q6ZQN5 318 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 CSTL1Q9H114 145 aa13.62□□□□□ -0.23
MRPL28-209ENST00000481453 AMTNQ6UX39 209 aa13.61□□□□□ -0.23
MRPL28-209ENST00000481453 NF1P21359 2839 aa13.61□□□□□ -0.23
MRPL28-209ENST00000481453 TRAV12-3A0A0B4J271 114 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 A0A1W2PRX2 142 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 ZNF418Q8TF45 676 aaPredicted RBP13.6□□□□□ -0.23
MRPL28-209ENST00000481453 CITED2Q99967 270 aaPredicted RBP13.6□□□□□ -0.23
MRPL28-209ENST00000481453 AGRNO00468 2067 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 TRAV2A0A0B4J234 112 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 NXPH4O95158 308 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 LY6G6DO95868 133 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 BAALCQ8WXS3 180 aa13.6□□□□□ -0.23
MRPL28-209ENST00000481453 MTORP42345 2549 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 OR11H12B2RN74 326 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 SAP30O75446 220 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 TAL2Q16559 108 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 DEFB114Q30KQ6 69 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 PHLDA1Q8WV24 401 aaPredicted RBP13.59□□□□□ -0.23
MRPL28-209ENST00000481453 TRAV12-2A0A075B6T6 113 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
MRPL28-209ENST00000481453 NEGR1Q7Z3B1 354 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 POM121L12Q8N7R1 296 aa13.59□□□□□ -0.23
MRPL28-209ENST00000481453 HIST1H4GQ99525 98 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms