RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 RAB4AP20338 218 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 DEFA6Q01524 100 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 KIAA1644Q3SXP7 199 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 RNF185Q96GF1 192 aa12.56□□□□□ -0.4
UPF3A-206ENST00000480362 RS1O15537 224 aa12.55□□□□□ -0.4
UPF3A-206ENST00000480362 FAM222AQ5U5X8 452 aa12.55□□□□□ -0.4
UPF3A-206ENST00000480362 CFAP126Q5VTH2 177 aa12.55□□□□□ -0.4
UPF3A-206ENST00000480362 LYRM9A8MSI8 78 aa12.54□□□□□ -0.4
UPF3A-206ENST00000480362 MGPP08493 103 aa12.54□□□□□ -0.4
UPF3A-206ENST00000480362 LINC00315P59091 139 aa12.54□□□□□ -0.4
UPF3A-206ENST00000480362 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
UPF3A-206ENST00000480362 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
UPF3A-206ENST00000480362 DKK2Q9UBU2 259 aa12.54□□□□□ -0.4
UPF3A-206ENST00000480362 C1orf196B1AJZ1 125 aa12.53□□□□□ -0.4
UPF3A-206ENST00000480362 PHOX2AO14813 284 aa12.53□□□□□ -0.4
UPF3A-206ENST00000480362 POM121L12Q8N7R1 296 aa12.53□□□□□ -0.4
UPF3A-206ENST00000480362 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
UPF3A-206ENST00000480362 B9D2Q9BPU9 175 aa12.53□□□□□ -0.4
UPF3A-206ENST00000480362 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 DEFB130BP0DP73 79 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 DEFB130AP0DP74 79 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 ZMAT4Q9H898 229 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
UPF3A-206ENST00000480362 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
UPF3A-206ENST00000480362 F5H697 171 aa12.51□□□□□ -0.41
UPF3A-206ENST00000480362 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
UPF3A-206ENST00000480362 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
UPF3A-206ENST00000480362 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
UPF3A-206ENST00000480362 SMKR1H3BMG3 65 aa12.5□□□□□ -0.41
UPF3A-206ENST00000480362 IGHV3-53P01767 116 aa12.5□□□□□ -0.41
UPF3A-206ENST00000480362 CKS2P33552 79 aa12.5□□□□□ -0.41
UPF3A-206ENST00000480362 ZNF56Q15929 161 aa12.5□□□□□ -0.41
UPF3A-206ENST00000480362 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
UPF3A-206ENST00000480362 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
UPF3A-206ENST00000480362 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 D6R8Y8 96 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 RHODO00212 210 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 NCR2O95944 276 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 ZFP2Q6ZN57 461 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 ALKBH7Q9BT30 221 aaPredicted RBP12.49□□□□□ -0.41
UPF3A-206ENST00000480362 U3KQK5 164 aa12.49□□□□□ -0.41
UPF3A-206ENST00000480362 FBN3Q75N90 2809 aa12.48□□□□□ -0.41
UPF3A-206ENST00000480362 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
UPF3A-206ENST00000480362 PPBPP02775 128 aa12.48□□□□□ -0.41
UPF3A-206ENST00000480362 SRIP30626 198 aa12.48□□□□□ -0.41
UPF3A-206ENST00000480362 DAD1P61803 113 aa12.48□□□□□ -0.41
UPF3A-206ENST00000480362 ORMDL3Q8N138 153 aa12.48□□□□□ -0.41
UPF3A-206ENST00000480362 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
UPF3A-206ENST00000480362 CIDEAO60543 219 aa12.47□□□□□ -0.41
UPF3A-206ENST00000480362 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
UPF3A-206ENST00000480362 RAB5BP61020 215 aa12.47□□□□□ -0.41
UPF3A-206ENST00000480362 SUMO4Q6EEV6 95 aa12.47□□□□□ -0.41
UPF3A-206ENST00000480362 Q6ZSN1 163 aa12.47□□□□□ -0.41
UPF3A-206ENST00000480362 PRELID3AQ96N28 172 aa12.47□□□□□ -0.41
UPF3A-206ENST00000480362 NACAE9PAV3 2078 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BKO60814 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BJP06899 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BOP23527 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BBP33778 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
UPF3A-206ENST00000480362 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.42
UPF3A-206ENST00000480362 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
UPF3A-206ENST00000480362 M0QY20 66 aa12.44□□□□□ -0.42
UPF3A-206ENST00000480362 NHLRC4P0CG21 123 aaPredicted RBP12.44□□□□□ -0.42
UPF3A-206ENST00000480362 FHL2Q14192 279 aa12.44□□□□□ -0.42
UPF3A-206ENST00000480362 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
UPF3A-206ENST00000480362 TMA7Q9Y2S6 64 aaKnown RBP12.44□□□□□ -0.42
UPF3A-206ENST00000480362 TNFRSF6BO95407 300 aa12.43□□□□□ -0.42
UPF3A-206ENST00000480362 NPYP01303 97 aa12.43□□□□□ -0.42
UPF3A-206ENST00000480362 C12orf74Q32Q52 190 aa12.43□□□□□ -0.42
UPF3A-206ENST00000480362 NRACQ8N912 160 aa12.43□□□□□ -0.42
UPF3A-206ENST00000480362 H7C1H1 209 aa12.42□□□□□ -0.42
UPF3A-206ENST00000480362 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
UPF3A-206ENST00000480362 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
UPF3A-206ENST00000480362 C18orf32Q8TCD1 76 aa12.42□□□□□ -0.42
UPF3A-206ENST00000480362 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
UPF3A-206ENST00000480362 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
UPF3A-206ENST00000480362 PPP1R17O96001 155 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 ATP5G1P05496 136 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 P0DMU3 169 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 HOXA5P20719 270 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 NIT2Q9NQR4 276 aa12.41□□□□□ -0.42
UPF3A-206ENST00000480362 NDUFA6P56556 154 aa12.4□□□□□ -0.42
UPF3A-206ENST00000480362 Q0VG73 95 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms