RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 IGKV2D-40P01614 121 aaPredicted RBP6.01□□□□□ -1.45
USP54-212ENST00000480210 ERCC8Q13216 396 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 SPINK13Q1W4C9 94 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 TDRG1Q3Y452 100 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 FAM231DQ6ZW35 169 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 ERASQ7Z444 233 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 SPATA12Q7Z6I5 190 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 OR10AG1Q8NH19 301 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 C18orf32Q8TCD1 76 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 TSKUQ8WUA8 353 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 LINC00467Q9BRT7 94 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 MAP1LC3CQ9BXW4 147 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 PSG8Q9UQ74 426 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 KLF12Q9Y4X4 402 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 TEX48A0A1B0GUV7 120 aa6□□□□□ -1.45
USP54-212ENST00000480210 SMIM27A0A1W2PRY6 76 aa6□□□□□ -1.45
USP54-212ENST00000480210 F8W1H4 67 aa6□□□□□ -1.45
USP54-212ENST00000480210 FABP2P12104 132 aa6□□□□□ -1.45
USP54-212ENST00000480210 TCL1AP56279 114 aa6□□□□□ -1.45
USP54-212ENST00000480210 FXYD7P58549 80 aa6□□□□□ -1.45
USP54-212ENST00000480210 LINC00310P59036 64 aa6□□□□□ -1.45
USP54-212ENST00000480210 GNG5P63218 68 aa6□□□□□ -1.45
USP54-212ENST00000480210 RPL24P83731 157 aaKnown RBP6□□□□□ -1.45
USP54-212ENST00000480210 RRN3P1Q2M238 152 aa6□□□□□ -1.45
USP54-212ENST00000480210 Q6AWC8 147 aa6□□□□□ -1.45
USP54-212ENST00000480210 UFSP1Q6NVU6 142 aa6□□□□□ -1.45
USP54-212ENST00000480210 ZNF493Q6ZR52 646 aa6□□□□□ -1.45
USP54-212ENST00000480210 TMEM136Q6ZRR5 245 aa6□□□□□ -1.45
USP54-212ENST00000480210 OCC1Q8TAD7 63 aa6□□□□□ -1.45
USP54-212ENST00000480210 LINC01587Q99440 93 aa6□□□□□ -1.45
USP54-212ENST00000480210 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
USP54-212ENST00000480210 SPANXCQ9NY87 97 aa6□□□□□ -1.45
USP54-212ENST00000480210 TRAV21A0A0B4J279 112 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 FAM231BA6NCW3 169 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 SRIP30626 198 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 ATP5G3P48201 142 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 TCTAP57738 103 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 HSD52Q0P140 79 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 MPV17L2Q567V2 206 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 TMEM97Q5BJF2 176 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 COX8CQ7Z4L0 72 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 BOD1L2Q8IYS8 172 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 C1orf158Q8N1D5 194 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 ZFAND2AQ8N6M9 145 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 NHLRC2Q8NBF2 726 aa5.99□□□□□ -1.45
USP54-212ENST00000480210 C11orf68Q9H3H3 251 aaKnown RBP5.99□□□□□ -1.45
USP54-212ENST00000480210 PRKDCP78527 4128 aaKnown RBP5.99□□□□□ -1.45
USP54-212ENST00000480210 TRAV12-2A0A075B6T6 113 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 A0A1B0GW15 77 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 FABP5P3A8MUU1 101 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 IGLV2-11P01706 119 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 COX8AP10176 69 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 RNASE4P34096 147 aaKnown RBP5.98□□□□□ -1.45
USP54-212ENST00000480210 CKS1BP61024 79 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 ANXA2RQ3ZCQ2 193 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 PRNTQ86SH4 94 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 C16orf74Q96GX8 76 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 MRPL16Q9NX20 251 aaKnown RBP5.98□□□□□ -1.45
USP54-212ENST00000480210 V9GYV3 84 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 X6R8D5 127 aa5.98□□□□□ -1.45
USP54-212ENST00000480210 IGHV1OR15-1A0A075B7D0 117 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 TRAV12-3A0A0B4J271 114 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 TRAV34A0A0B4J273 112 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 SYS1-DBNDD2H3BUS1 97 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 LEPROTL1O95214 131 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 LTAP01374 205 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 NTF3P20783 257 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 CT83Q5H943 113 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 IBA57Q5T440 356 aaKnown RBP5.97□□□□□ -1.45
USP54-212ENST00000480210 FAM159AQ6UWV7 190 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 TMEM263Q8WUH6 116 aaKnown RBP5.97□□□□□ -1.45
USP54-212ENST00000480210 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 SCRT2Q9NQ03 307 aa5.97□□□□□ -1.45
USP54-212ENST00000480210 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
USP54-212ENST00000480210 TRGV11A0A075B6L2 103 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 IGHV3OR16-12A0A075B7B8 117 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 SCO2A0A1W2PP80 73 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 J3KRW8 73 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 Q86TA4 180 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 Q8NAQ8 132 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 Q8TAT8 98 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 LINC00479Q96M42 142 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 DERL1Q9BUN8 251 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 GFRA4Q9GZZ7 299 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 EDA2RQ9HAV5 297 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 RETNQ9HD89 108 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 CYSLTR1Q9Y271 337 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.46
USP54-212ENST00000480210 IGHV4-28A0A0C4DH34 117 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 MUC21A0A0G2JKD1 596 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 MUC21A0A140T8X8 626 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 GAGE12HA6NDE8 117 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 LYRM9A8MSI8 78 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 SPART-AS1P0CW21 52 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 AZU1P20160 251 aa5.95□□□□□ -1.46
USP54-212ENST00000480210 MUC21Q5SSG8 566 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms